RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CLDN7O95471 211 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 PTPN2P17706 415 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 AP1S1P61966 158 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 PROSER1Q86XN7 944 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 SIDT2Q8NBJ9 832 aaKnown RBP17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 DNAJB14Q8TBM8 379 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 RAB2BQ8WUD1 216 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 LMLNQ96KR4 655 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 BBS2Q9BXC9 721 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 TDP1Q9NUW8 608 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 CEP290O15078 2479 aa17.98■□□□□ 0.47
PDLIM3-201ENST00000284767 C1orf232A0A0U1RR37 186 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 SERPINB7O75635 380 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 CYBBP04839 570 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 HNF1BP35680 557 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 PSMD7P51665 324 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 SUOXP51687 545 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 KCNC4Q03721 635 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 PLCL1Q15111 1095 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 FXNQ16595 210 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 RABL3Q5HYI8 236 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 BROXQ5VW32 411 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 NIPAL1Q6NVV3 410 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 PSRC1Q6PGN9 363 aaPredicted RBP17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 TSPAN33Q86UF1 283 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 IFNEQ86WN2 208 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 GPN2Q9H9Y4 310 aaPredicted RBP17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 SARS2Q9NP81 518 aaKnown RBP17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 WDR37Q9Y2I8 494 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 WNT6Q9Y6F9 365 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 SULT1C4O75897 302 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 BCL10O95999 233 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 LINC00032P0C843 101 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 ZNF182P17025 639 aaPredicted RBP17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 MATN1P21941 496 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 HTR1EP28566 365 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 ZC3H7AQ8IWR0 971 aaKnown RBP17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 TFB2MQ9H5Q4 396 aaKnown RBP17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 CERS4Q9HA82 394 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 PKP3Q9Y446 797 aa17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 HELZP42694 1942 aaKnown RBP17.97■□□□□ 0.47
PDLIM3-201ENST00000284767 K7EPI3 171 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 PRR35P0CG20 571 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 MTHFD2P13995 350 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 NCK1P16333 377 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 PSMA3P25788 255 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 WEE1P30291 646 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 HMGCLP35914 325 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 YAP1P46937 504 aaKnown RBP17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 LCP2Q13094 533 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 PFKFB4Q16877 469 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 BPIFB1Q8TDL5 484 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 HERVK_113Q902F9 699 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 KCNA7Q96RP8 456 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 FANCEQ9HB96 536 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 PFDN4Q9NQP4 134 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 AIG1Q9NVV5 245 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 TAS2R13Q9NYV9 303 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 SELENONQ9NZV5 590 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 LEF1Q9UJU2 399 aaPredicted RBP17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 ASPDHA6ND91 283 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 CFAP99D6REC4 459 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 CDC7O00311 574 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 GAPDHSO14556 408 aaPredicted RBP17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 TRBC1P01850 177 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 POLR2IP36954 125 aaKnown RBP17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 CCR3P51677 355 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 EPHA5P54756 1037 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 NR1D2Q14995 579 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 TSNQ15631 228 aaKnown RBP17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 CRY1Q16526 586 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 LY6G5CQ5SRR4 150 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 C12orf76Q8N812 135 aaPredicted RBP17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 OR2AP1Q8NGE2 309 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 SORCS1Q8WY21 1168 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 BIRC7Q96CA5 298 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 ITPKCQ96DU7 683 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 MAGED4Q96JG8 741 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 ATOH8Q96SQ7 321 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 BOCQ9BWV1 1114 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 TRIM8Q9BZR9 551 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 SOX17Q9H6I2 414 aaPredicted RBP17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 MAGEE1Q9HCI5 957 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 PSME2Q9UL46 239 aa17.96■□□□□ 0.47
PDLIM3-201ENST00000284767 NCF1BA6NI72 391 aaPredicted RBP17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 NCF1CA8MVU1 366 aaPredicted RBP17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 NPPAP01160 153 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 FUCA1P04066 466 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 NCF1P14598 390 aaPredicted RBP17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 EEF1B2P24534 225 aaKnown RBP17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 DIO3P55073 304 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 RGS21Q2M5E4 152 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 CHST15Q7LFX5 561 aaPredicted RBP17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 NSUN5Q96P11 429 aaKnown RBP17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 CHID1Q9BWS9 393 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 ZFYVE1Q9HBF4 777 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 RIC8BQ9NVN3 520 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 ERGIC3Q9Y282 383 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 BTRCQ9Y297 605 aa17.95■□□□□ 0.46
PDLIM3-201ENST00000284767 ABCB7O75027 752 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms