RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 EFNA1P20827 205 aaPredicted RBP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 OR1E1P30953 314 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 HSPA7P48741 367 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 IFITM2Q01629 132 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 RSBN1Q5VWQ0 802 aaPredicted RBP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 VMP1Q96GC9 406 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 DERL2Q9GZP9 239 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 REXO4Q9GZR2 422 aaKnown RBP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 SLIRPQ9GZT3 109 aaKnown RBP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 DCSTAMPQ9H295 470 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 NEUROG3Q9Y4Z2 214 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 NYNRINQ9P2P1 1898 aaKnown RBP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 A0A096LPI6 279 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 A0A0D9SEW6 157 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 LCHNA4D1U4 455 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 H0Y626 953 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 ASNA1O43681 348 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 CREG1O75629 220 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 MFN2O95140 757 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 TRIM16O95361 564 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 C21orf33P30042 268 aaPredicted RBP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 ZNF135P52742 658 aaPredicted RBP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 MVKQ03426 396 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 TP53BP2Q13625 1128 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 VASH1Q7L8A9 365 aaPredicted RBP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 LYSMD2Q8IV50 215 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 GPC2Q8N158 579 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 LIX1Q8N485 282 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 CELF2-AS1Q8N7Q2 184 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 GTF2H4Q92759 462 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 OR52E6Q96RD3 313 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 CTRCQ99895 268 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 TRIT1Q9H3H1 467 aaKnown RBP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 IPPKQ9H8X2 491 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 PRM3Q9NNZ6 103 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 ITGB1BP2Q9UKP3 347 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 ZNF451Q9Y4E5 1061 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 TRIP12Q14669 1992 aaPredicted RBP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 ARL5CA6NH57 179 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 RRN3P2A6NIE6 340 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 FAM47E-STBD1D6RA91 191 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 SEC22BO75396 215 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 CLK3P49761 638 aaKnown RBP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 MADCAM1Q13477 382 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 LRIT3Q3SXY7 679 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 XKR4Q5GH76 650 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 PRSS36Q5K4E3 855 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 BRMS1LQ5PSV4 323 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 ARTNQ5T4W7 220 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 FBXL22Q6P050 247 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 GLT6D1Q7Z4J2 308 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 MSRB3Q8IXL7 192 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 RHOXF1Q8NHV9 184 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 TSPEARQ8WU66 669 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 ATL1Q8WXF7 558 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 FAM120BQ96EK7 910 aaKnown RBP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 BTN2A3PQ96KV6 586 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 DMRTB1Q96MA1 342 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 ZNF300Q96RE9 604 aaPredicted RBP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 BTBD2Q9BX70 525 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 DPY30Q9C005 99 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 NSUN3Q9H649 340 aaKnown RBP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 RMND5AQ9H871 391 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 DDX28Q9NUL7 540 aaKnown RBP12.67□□□□□ -0.38
COL8A1-202ENST00000273342 SCN3BQ9NY72 215 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 FKBPLQ9UIM3 349 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 PCDHGC4Q9Y5F7 938 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 PCDHGA3Q9Y5H0 932 aa12.67□□□□□ -0.38
COL8A1-202ENST00000273342 RAMP2O60895 175 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 RFPL2O75678 378 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 IGLV3-25P01717 112 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 HSMCR30P0CW71 290 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 AKT1P31749 480 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 GRK4P32298 578 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 GJA5P36382 358 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 BMPR1AP36894 532 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 NUDT6P53370 316 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 GABARAPL2P60520 117 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 IL2P60568 153 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 GBX1Q14549 363 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 ZNF792Q3KQV3 632 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 DUSP28Q4G0W2 176 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 MS4A13Q5J8X5 152 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 MFSD4BQ5TF39 518 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 MSANTD2Q6P1R3 559 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 VTCN1Q7Z7D3 282 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 SPATA2LQ8IUW3 424 aaPredicted RBP12.66□□□□□ -0.38
COL8A1-202ENST00000273342 ZDHHC21Q8IVQ6 265 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 PIK3C3Q8NEB9 887 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 GPRC5AQ8NFJ5 357 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 OR5K1Q8NHB7 308 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 PROX1Q92786 737 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 ZYG11BQ9C0D3 744 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 ROGDIQ9GZN7 287 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 C14orf119Q9NWQ9 140 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 PDHXO00330 501 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 PER2O15055 1255 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 KRT75O95678 551 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms