RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 ZDHHC4Q9NPG8 344 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 TMEM45AQ9NWC5 275 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 ADA2Q9NZK5 511 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 ZIM2Q9NZV7 527 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 CD300AQ9UGN4 299 aa16.26■□□□□ 0.19
CCDC40-201ENST00000269318 LRRK1Q38SD2 2015 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 DENND4AQ7Z401 1863 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 SLC5A10A0PJK1 596 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 K7ESM1 405 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 NVLO15381 856 aaKnown RBP16.25■□□□□ 0.19
CCDC40-201ENST00000269318 ATG13O75143 517 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 BCAS2O75934 225 aaPredicted RBP16.25■□□□□ 0.19
CCDC40-201ENST00000269318 GSTM1P09488 218 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 PSMC3P17980 439 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 CYP2A7P20853 494 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 UFM1P61960 85 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 GSTM4Q03013 218 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 FLOT2Q14254 428 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 LAYNQ6UX15 382 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 ERN2Q76MJ5 926 aaKnown RBP16.25■□□□□ 0.19
CCDC40-201ENST00000269318 MMAAQ8IVH4 418 aaKnown RBP16.25■□□□□ 0.19
CCDC40-201ENST00000269318 GLMNQ92990 594 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 NUS1Q96E22 293 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 CCM2Q9BSQ5 444 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 EPHX3Q9H6B9 360 aa16.25■□□□□ 0.19
CCDC40-201ENST00000269318 SUCOQ9UBS9 1254 aaKnown RBP16.25■□□□□ 0.19
CCDC40-201ENST00000269318 A0A1W2PP18 115 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 PRORSD1PA6NEY8 169 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 FXYD1O00168 92 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 ANGPT2O15123 496 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 MAP3K7O43318 606 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 MMP20O60882 483 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 PSIP1O75475 530 aaKnown RBP16.24■□□□□ 0.19
CCDC40-201ENST00000269318 SLC22A3O75751 556 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 BAG2O95816 211 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 DPTQ07507 201 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 NR6A1Q15406 480 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 EGFLAMQ63HQ2 1017 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 PARM1Q6UWI2 310 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 TRIM46Q7Z4K8 759 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 YAF2Q8IY57 180 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 FAM156AQ8NDB6 213 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 MCOLN3Q8TDD5 553 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 FGF14Q92915 247 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 USP7Q93009 1102 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 ELSPBP1Q96BH3 223 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 ASB9Q96DX5 294 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 SPDL1Q96EA4 605 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 LRCH3Q96II8 777 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 SLC39A3Q9BRY0 314 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 HDAC8Q9BY41 377 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 SLC29A3Q9BZD2 475 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 MRPL40Q9NQ50 206 aaKnown RBP16.24■□□□□ 0.19
CCDC40-201ENST00000269318 KRT87PA6NCN2 255 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 ASPDHA6ND91 283 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 FFAR3O14843 346 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 GPR42O15529 346 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 CLDN9O95484 217 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 EPHX1P07099 455 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 IL12AP29459 219 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 P2RY2P41231 377 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 GRIA2P42262 883 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 AP5B1Q2VPB7 878 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 PTCHD3Q3KNS1 767 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 RFTN2Q52LD8 501 aaPredicted RBP16.24■□□□□ 0.19
CCDC40-201ENST00000269318 CMPK2Q5EBM0 449 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 ATAT1Q5SQI0 421 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 NEK5Q6P3R8 708 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 TMEM220Q6QAJ8 160 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 DSG4Q86SJ6 1040 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 DHDDSQ86SQ9 333 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 LILRA3Q8N6C8 439 aaPredicted RBP16.24■□□□□ 0.19
CCDC40-201ENST00000269318 PROKR1Q8TCW9 393 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 S1PR5Q9H228 398 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 ACTL8Q9H568 366 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 DYRK4Q9NR20 520 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 FARSBQ9NSD9 589 aaKnown RBP16.24■□□□□ 0.19
CCDC40-201ENST00000269318 GULP1Q9UBP9 304 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 KLQ9UEF7 1012 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 MCM8Q9UJA3 840 aa16.24■□□□□ 0.19
CCDC40-201ENST00000269318 KCNE1BA0A087WTH5 132 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 ARHGEF33A8MVX0 844 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 C1QTNF3-AMACRE9PGA6 284 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 ARNTLO00327 626 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 MANBAO00462 879 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 ANKRD28O15084 1053 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 LILRB5O75023 590 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 ULK1O75385 1050 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 LAMP2P13473 410 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 ENPP2Q13822 863 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 TRIM25Q14258 630 aaKnown RBP16.23■□□□□ 0.19
CCDC40-201ENST00000269318 TAF11Q15544 211 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 GGTA1PQ4G0N0 100 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 BCL7AQ4VC05 210 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.23■□□□□ 0.19
CCDC40-201ENST00000269318 HOMEZQ8IX15 550 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 MINDY1Q8N5J2 469 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 DNAJC9Q8WXX5 260 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 TMEM159Q96B96 161 aa16.23■□□□□ 0.19
CCDC40-201ENST00000269318 FBXL8Q96CD0 374 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms