RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 PDE10AQ9Y233 779 aa15.03■□□□□ -0
COPS3-201ENST00000268717 PCDHGA2Q9Y5H1 932 aa15.03■□□□□ -0
COPS3-201ENST00000268717 ST14Q9Y5Y6 855 aa15.03■□□□□ -0
COPS3-201ENST00000268717 EP300Q09472 2414 aaPredicted RBP15.02■□□□□ -0
COPS3-201ENST00000268717 PABPN1LA6NDY0 278 aaKnown RBP15.02□□□□□ -0.01
COPS3-201ENST00000268717 OR2AG2A6NM03 316 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 GPR89AB7ZAQ6 455 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 K7EPI3 171 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 K7ESF4 209 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 PPP6CO00743 305 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 LILRB5O75023 590 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 SKAP2O75563 359 aaPredicted RBP15.02□□□□□ -0.01
COPS3-201ENST00000268717 HIST1H2AGP0C0S8 130 aaPredicted RBP15.02□□□□□ -0.01
COPS3-201ENST00000268717 GPR89BP0CG08 455 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 TSPAN8P19075 237 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 HIST1H2ADP20671 130 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 RPIAP49247 311 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 SFSWAPQ12872 951 aaKnown RBP15.02□□□□□ -0.01
COPS3-201ENST00000268717 GTF2H2Q13888 395 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 RBBP7Q16576 425 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 MAP7D1Q3KQU3 841 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 DNAL1Q4LDG9 190 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 SYTL3Q4VX76 610 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 CLEC6AQ6EIG7 209 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 KIAA1161Q6NSJ0 714 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 GTF2H2CQ6P1K8 395 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 TMEM220Q6QAJ8 160 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 LRRC70Q7Z2Q7 622 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 GOLGA7Q7Z5G4 137 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 SYVN1Q86TM6 617 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 C10orf67Q8IYJ2 551 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 SLC22A15Q8IZD6 547 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 KIF2BQ8N4N8 673 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 RPLP0P6Q8NHW5 317 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 HIC2Q96JB3 615 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 HIST1H2AHQ96KK5 128 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 HIST1H2AJQ99878 128 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 TMEM79Q9BSE2 394 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 H2AFJQ9BTM1 129 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 TAS2R1Q9NYW7 299 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 OPTCQ9UBM4 332 aa15.02□□□□□ -0.01
COPS3-201ENST00000268717 OTOGLQ3ZCN5 2332 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 A0A1W2PP55 124 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 A0A1W2PQF6 199 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 KLHL33A6NCF5 533 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 K7ESM1 405 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 INPP4BO15327 924 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 GYG2O15488 501 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 PLRG1O43660 514 aaKnown RBP15.01□□□□□ -0.01
COPS3-201ENST00000268717 ADAM23O75077 832 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 KATNA1O75449 491 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 PSIP1O75475 530 aaKnown RBP15.01□□□□□ -0.01
COPS3-201ENST00000268717 CRCPO75575 148 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 DNTTP04053 509 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 HOXB2P14652 356 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 NXNQ6DKJ4 435 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 PNCKQ6P2M8 343 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.01□□□□□ -0.01
COPS3-201ENST00000268717 LARP4Q71RC2 724 aaKnown RBP eCLIP15.01□□□□□ -0.01
COPS3-201ENST00000268717 VRK3Q8IV63 474 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 ARHGAP24Q8N264 748 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 FBXO15Q8NCQ5 510 aaPredicted RBP15.01□□□□□ -0.01
COPS3-201ENST00000268717 RP9Q8TA86 221 aaKnown RBP15.01□□□□□ -0.01
COPS3-201ENST00000268717 MCOLN3Q8TDD5 553 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 ZNF225Q9UK10 706 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 FZD4Q9ULV1 537 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 ASB1Q9Y576 335 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 GPR179Q6PRD1 2367 aa15.01□□□□□ -0.01
COPS3-201ENST00000268717 SPAG17Q6Q759 2223 aa15□□□□□ -0.01
COPS3-201ENST00000268717 EML5Q05BV3 1969 aa15□□□□□ -0.01
COPS3-201ENST00000268717 PRR23AA6NEV1 266 aa15□□□□□ -0.01
COPS3-201ENST00000268717 UBDO15205 165 aa15□□□□□ -0.01
COPS3-201ENST00000268717 STK16O75716 305 aa15□□□□□ -0.01
COPS3-201ENST00000268717 KLF8O95600 359 aaPredicted RBP15□□□□□ -0.01
COPS3-201ENST00000268717 GUCA1CO95843 209 aa15□□□□□ -0.01
COPS3-201ENST00000268717 KRT16P08779 473 aa15□□□□□ -0.01
COPS3-201ENST00000268717 THRAP10827 490 aa15□□□□□ -0.01
COPS3-201ENST00000268717 MRPL19P49406 292 aaKnown RBP15□□□□□ -0.01
COPS3-201ENST00000268717 RPS21P63220 83 aaKnown RBP15□□□□□ -0.01
COPS3-201ENST00000268717 ELF3P78545 371 aaPredicted RBP15□□□□□ -0.01
COPS3-201ENST00000268717 SQLEQ14534 574 aa15□□□□□ -0.01
COPS3-201ENST00000268717 TTC31Q49AM3 519 aaPredicted RBP15□□□□□ -0.01
COPS3-201ENST00000268717 XKR7Q5GH72 579 aa15□□□□□ -0.01
COPS3-201ENST00000268717 KIAA1211LQ6NV74 962 aa15□□□□□ -0.01
COPS3-201ENST00000268717 NEK5Q6P3R8 708 aa15□□□□□ -0.01
COPS3-201ENST00000268717 USP30Q70CQ3 517 aa15□□□□□ -0.01
COPS3-201ENST00000268717 KBTBD6Q86V97 674 aa15□□□□□ -0.01
COPS3-201ENST00000268717 KLHDC8AQ8IYD2 350 aa15□□□□□ -0.01
COPS3-201ENST00000268717 BEND7Q8N7W2 519 aaPredicted RBP15□□□□□ -0.01
COPS3-201ENST00000268717 ASB12Q8WXK4 309 aa15□□□□□ -0.01
COPS3-201ENST00000268717 UTP4Q969X6 686 aaKnown RBP15□□□□□ -0.01
COPS3-201ENST00000268717 FBXL8Q96CD0 374 aa15□□□□□ -0.01
COPS3-201ENST00000268717 MIPEPQ99797 713 aa15□□□□□ -0.01
COPS3-201ENST00000268717 NTMT1Q9BV86 223 aa15□□□□□ -0.01
COPS3-201ENST00000268717 MKRN2Q9H000 416 aaKnown RBP15□□□□□ -0.01
COPS3-201ENST00000268717 OR2AG1Q9H205 316 aa15□□□□□ -0.01
COPS3-201ENST00000268717 RASSF4Q9H2L5 321 aa15□□□□□ -0.01
COPS3-201ENST00000268717 NOL11Q9H8H0 719 aaKnown RBP15□□□□□ -0.01
COPS3-201ENST00000268717 PREBQ9HCU5 417 aa15□□□□□ -0.01
COPS3-201ENST00000268717 ARL15Q9NXU5 204 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms