RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 M0QZQ0 153 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 UGT2B17O75795 530 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 CYBAP13498 195 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 HMGCS1Q01581 520 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 ENDOVQ8N8Q3 282 aaKnown RBP16.43■□□□□ 0.22
PHRF1-201ENST00000264555 OR14C36Q8NHC7 312 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 MIPEPQ99797 713 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 RIOK2Q9BVS4 552 aaKnown RBP16.43■□□□□ 0.22
PHRF1-201ENST00000264555 OR2AG1Q9H205 316 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 C11orf49Q9H6J7 331 aa16.43■□□□□ 0.22
PHRF1-201ENST00000264555 CCL5P13501 91 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 ATP1B2P14415 290 aaPredicted RBP16.42■□□□□ 0.22
PHRF1-201ENST00000264555 ZNF30P17039 623 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 IGFBP4P22692 258 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 GTF2E2P29084 291 aaKnown RBP16.42■□□□□ 0.22
PHRF1-201ENST00000264555 CTSKP43235 329 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 PSMD7P51665 324 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 CMTM8Q8IZV2 173 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 TEX47Q8TBZ9 253 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 S100ZQ8WXG8 99 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 MTERF1Q99551 399 aaKnown RBP16.42■□□□□ 0.22
PHRF1-201ENST00000264555 SOHLH2Q9NX45 425 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 ADAMDEC1O15204 470 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 NDUFS2O75306 463 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 SERPINA1P01009 418 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 SLC35E2BP0CK96 405 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 GJA1P17302 382 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 GUCA1AP43080 201 aaPredicted RBP16.42■□□□□ 0.22
PHRF1-201ENST00000264555 ATP4BP51164 291 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 UBAP2Q5T6F2 1119 aaKnown RBP16.42■□□□□ 0.22
PHRF1-201ENST00000264555 FAM92BQ6ZTR7 304 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 GOLGA7Q7Z5G4 137 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 DUSP26Q9BV47 211 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 AASDHPPTQ9NRN7 309 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 PIPSLA2A3N6 862 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 ARPC2O15144 300 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 IFNA16P05015 189 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 VIPR1P32241 457 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 RSBN1Q5VWQ0 802 aaPredicted RBP16.42■□□□□ 0.22
PHRF1-201ENST00000264555 TMEM214Q6NUQ4 689 aaKnown RBP16.42■□□□□ 0.22
PHRF1-201ENST00000264555 OR4F6Q8NGB9 312 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 CANT1Q8WVQ1 401 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 CGREF1Q99674 301 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 IFNW1P05000 195 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 PSMA3P25788 255 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 VARSP26640 1264 aaKnown RBP16.42■□□□□ 0.22
PHRF1-201ENST00000264555 HEPACAMQ14CZ8 416 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 ZDHHC21Q8IVQ6 265 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 XAGE5Q8WWM1 108 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 FBXL21Q9UKT6 434 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 SH3GLB1Q9Y371 365 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 NRAPQ86VF7 1730 aa16.42■□□□□ 0.22
PHRF1-201ENST00000264555 A0A1W2PP18 115 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 ENO2P09104 434 aaPredicted RBP16.41■□□□□ 0.22
PHRF1-201ENST00000264555 MTHFD1P11586 935 aaKnown RBP16.41■□□□□ 0.22
PHRF1-201ENST00000264555 CDH1P12830 882 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 BMP7P18075 431 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 CCR4P51679 360 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 CCNHP51946 323 aaPredicted RBP16.41■□□□□ 0.22
PHRF1-201ENST00000264555 PTSQ03393 145 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 CLDN19Q8N6F1 224 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 PACRGLQ8N7B6 248 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 PIK3C3Q8NEB9 887 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 PYCR2Q96C36 320 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 VPS29Q9UBQ0 182 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 ZNF282Q9UDV7 671 aaPredicted RBP16.41■□□□□ 0.22
PHRF1-201ENST00000264555 MYH4Q9Y623 1939 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 BCAS2O75934 225 aaPredicted RBP16.41■□□□□ 0.22
PHRF1-201ENST00000264555 NUDT14O95848 222 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 CCR10P46092 362 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 OLR1P78380 273 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 NR1D2Q14995 579 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 TGFBIQ15582 683 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 TECRLQ5HYJ1 363 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 Q6ZVU0 165 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 VN1R5Q7Z5H4 357 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 SLC43A3Q8NBI5 491 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 TDP1Q9NUW8 608 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 TRPS1Q9UHF7 1281 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 GJB5O95377 273 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 FAM171BQ6P995 826 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 RPS27LQ71UM5 84 aaKnown RBP16.41■□□□□ 0.22
PHRF1-201ENST00000264555 TP53INP2Q8IXH6 220 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 NUS1Q96E22 293 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 HDHD2Q9H0R4 259 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 INPPL1O15357 1258 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 RGS10O43665 173 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 TRMUO75648 421 aaKnown RBP16.41■□□□□ 0.22
PHRF1-201ENST00000264555 TAS2R41P59536 307 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 LRRC66Q68CR7 880 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 RHEBL1Q8TAI7 183 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 EXOSC8Q96B26 276 aaKnown RBP16.41■□□□□ 0.22
PHRF1-201ENST00000264555 SLC39A3Q9BRY0 314 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 PRDM8Q9NQV8 689 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 KLHL1Q9NR64 748 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 RASSF1Q9NS23 344 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 H6PDO95479 791 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 ANGPTL1O95841 491 aa16.41■□□□□ 0.22
PHRF1-201ENST00000264555 DBTP11182 482 aaKnown RBP16.41■□□□□ 0.22
PHRF1-201ENST00000264555 ZBTB6Q15916 424 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms