RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 CLDN10P78369 228 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 TRIM71Q2Q1W2 868 aaKnown RBP13.75□□□□□ -0.21
CDH3-201ENST00000264012 TPRG1Q6ZUI0 275 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 GPRIN1Q7Z2K8 1008 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 FAM129CQ86XR2 697 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 PAAF1Q9BRP4 392 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 CREBZFQ9NS37 354 aa13.75□□□□□ -0.21
CDH3-201ENST00000264012 PAPSS2O95340 614 aaPredicted RBP13.74□□□□□ -0.21
CDH3-201ENST00000264012 EPOP01588 193 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 LYNP07948 512 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 CDH3P22223 829 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 FAM220AQ7Z4H9 259 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 HID1Q8IV36 788 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 CELF5Q8N6W0 485 aaKnown RBP13.74□□□□□ -0.21
CDH3-201ENST00000264012 TMEM40Q8WWA1 233 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 DUSP26Q9BV47 211 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 ZDHHC4Q9NPG8 344 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 ZNF624Q9P2J8 865 aaPredicted RBP13.74□□□□□ -0.21
CDH3-201ENST00000264012 DPPA5A6NC42 116 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 MFN2O95140 757 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 SLC10A3P09131 477 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 SYN1P17600 705 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 FSHRP23945 695 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 HNMTP50135 292 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 AP1S2P56377 157 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 GRSF1Q12849 480 aaKnown RBP eCLIP13.74□□□□□ -0.21
CDH3-201ENST00000264012 TAF13Q15543 124 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 EEF1AKMT1Q8WVE0 214 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 ZBED3Q96IU2 234 aaPredicted RBP13.74□□□□□ -0.21
CDH3-201ENST00000264012 PCDHAC1Q9H158 963 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 SCN2BO60939 215 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 LAMP2P13473 410 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 ZBTB6Q15916 424 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 NDUFA9Q16795 377 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 ALG11Q2TAA5 492 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 ZNF730Q6ZMV8 503 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 SEC14L1Q92503 715 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 ARHGAP39Q9C0H5 1083 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 WDR26Q9H7D7 661 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 ITM2CQ9NQX7 267 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 DMTF1Q9Y222 760 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 NUP98P52948 1817 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 MYH6P13533 1939 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 DNAJB1P25685 340 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 ITPKBP27987 946 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 SLC26A3P40879 764 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 RGS8P57771 180 aaPredicted RBP13.74□□□□□ -0.21
CDH3-201ENST00000264012 PTPRCAPQ14761 206 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 SLC9A5Q14940 896 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 LARS2Q15031 903 aaKnown RBP13.74□□□□□ -0.21
CDH3-201ENST00000264012 LIN52Q52LA3 116 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 MZT2AQ6P582 158 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 C22orf39Q6P5X5 142 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 CHID1Q9BWS9 393 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 LRRC3Q9BY71 257 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 C4BP0C0L5 1744 aa13.74□□□□□ -0.21
CDH3-201ENST00000264012 DNAJC25-GNG10A0A024R161 153 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 MYADML2A6NDP7 307 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 COCHO43405 550 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 ASNA1O43681 348 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 TYRP14679 529 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 RFC2P35250 354 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 RAB14P61106 215 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 STXBP1P61764 594 aaKnown RBP13.73□□□□□ -0.21
CDH3-201ENST00000264012 TEAD2Q15562 447 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 TMEM214Q6NUQ4 689 aaKnown RBP13.73□□□□□ -0.21
CDH3-201ENST00000264012 PIK3C3Q8NEB9 887 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 ZCCHC10Q8TBK6 192 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 ADAM7Q9H2U9 754 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 SRMSQ9H3Y6 488 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 SLC32A1Q9H598 525 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 MRM3Q9HC36 420 aaKnown RBP13.73□□□□□ -0.21
CDH3-201ENST00000264012 LCHNA4D1U4 455 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 ADAMDEC1O15204 470 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 CNMDO75829 334 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 VIPR1P32241 457 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 DLG1Q12959 904 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 PCLAFQ15004 111 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 LRRC66Q68CR7 880 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 C11orf88Q6PI97 169 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 SLC34A3Q8N130 599 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 C2CD4AQ8NCU7 369 aaPredicted RBP13.73□□□□□ -0.21
CDH3-201ENST00000264012 OVCA2Q8WZ82 227 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 DNASE1L2Q92874 299 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 EFCAB11Q9BUY7 163 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 TLR9Q9NR96 1032 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 BTBD3Q9Y2F9 522 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 CCDC88AQ3V6T2 1871 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 UPK3BL1B0FP48 263 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 UPK3BL2E5RIL1 263 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 hCG_2039718K7EN88 272 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 CBFA2T3O75081 653 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 CHRNA1P02708 482 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 ACP5P13686 325 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 ATP1B2P14415 290 aaPredicted RBP13.73□□□□□ -0.21
CDH3-201ENST00000264012 ADGRE1Q14246 886 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 TEAD4Q15561 434 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 FADS2P1A8MWK0 482 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 PCDH7O60245 1069 aa13.73□□□□□ -0.21
CDH3-201ENST00000264012 GJB5O95377 273 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms