RNA–Protein interactions for RNA: ENST00000262395.9

TRAF4-201, Transcript of TNF receptor associated factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF4, Length 2,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-201ENST00000262395 TUSC3Q13454 348 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 TRIP4Q15650 581 aaPredicted RBP17.63■□□□□ 0.41
TRAF4-201ENST00000262395 ANKRD13BQ86YJ7 626 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 RORBQ92753 470 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 GIN1Q9NXP7 522 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 TMEFF2Q9UIK5 374 aaPredicted RBP17.63■□□□□ 0.41
TRAF4-201ENST00000262395 IGLV3-10A0A075B6K4 115 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 ARNTLO00327 626 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 HPRP00739 348 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 BMP1P13497 986 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 THPOP40225 353 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 GSSP48637 474 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 NPTX1Q15818 432 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 PARP15Q460N3 678 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 LDLRAD1Q5T700 205 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 ZNF691Q5VV52 312 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 CCDC80Q76M96 950 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 SLC22A15Q8IZD6 547 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 CINPQ9BW66 212 aaPredicted RBP17.63■□□□□ 0.41
TRAF4-201ENST00000262395 C1QTNF3Q9BXJ4 246 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 DPY30Q9C005 99 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 RASSF1Q9NS23 344 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 RGS17Q9UGC6 210 aaPredicted RBP17.63■□□□□ 0.41
TRAF4-201ENST00000262395 C3orf18Q9UK00 162 aa17.63■□□□□ 0.41
TRAF4-201ENST00000262395 MOXD2PA6NHM9 499 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 SCAMP3O14828 347 aaKnown RBP17.62■□□□□ 0.41
TRAF4-201ENST00000262395 SEC22BO75396 215 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 PRLP01236 227 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 AKT1P31749 480 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 RPS24P62847 133 aaKnown RBP17.62■□□□□ 0.41
TRAF4-201ENST00000262395 TAF10Q12962 218 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 KIAA0040Q15053 153 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 GNASQ5JWF2 1037 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 CATSPEREQ5SY80 951 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 GORASP2Q9H8Y8 452 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 NLRC5Q86WI3 1866 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 TPD52L2O43399 206 aaKnown RBP17.62■□□□□ 0.41
TRAF4-201ENST00000262395 CREG1O75629 220 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 ZNF682O95780 498 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 ITIH1P19827 911 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 EPHA2P29317 976 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 RPS3AP61247 264 aaKnown RBP17.62■□□□□ 0.41
TRAF4-201ENST00000262395 SLC13A2Q13183 592 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 CES5AQ6NT32 575 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 LINGO4Q6UY18 593 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 PAGE2Q7Z2X7 111 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 SLC22A16Q86VW1 577 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 CYP4Z1Q86W10 505 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 SLC7A5P1Q8MH63 180 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 PJA1Q8NG27 643 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 GTF3C2Q8WUA4 911 aaPredicted RBP17.62■□□□□ 0.41
TRAF4-201ENST00000262395 SUSD3Q96L08 255 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 OR52E6Q96RD3 313 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 ZBTB18Q99592 522 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 EGFL8Q99944 293 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 PTPN18Q99952 460 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 MIR1-1HGQ9H1L0 117 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 PCDHB14Q9Y5E9 798 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 PTPRDP23468 1912 aa17.62■□□□□ 0.41
TRAF4-201ENST00000262395 PRR23BQ6ZRT6 265 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 NANOGNBQ7Z5D8 188 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 B3GNT8Q7Z7M8 397 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 OR8J3Q8NGG0 315 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 PSMA8Q8TAA3 256 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 SPC25Q9HBM1 224 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 FNIP2Q9P278 1114 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 INTS6Q9UL03 887 aaKnown RBP17.61■□□□□ 0.41
TRAF4-201ENST00000262395 VPS4AQ9UN37 437 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 CBX4O00257 560 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 STX7O15400 261 aaKnown RBP17.61■□□□□ 0.41
TRAF4-201ENST00000262395 EPOP01588 193 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 UGT2B4P06133 528 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 PGRP06401 933 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 HOXD9P28356 352 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-201ENST00000262395 CD6P30203 668 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 MRPL19P49406 292 aaKnown RBP17.61■□□□□ 0.41
TRAF4-201ENST00000262395 MFSD4BQ5TF39 518 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 SUSD1Q6UWL2 747 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 MBOAT1Q6ZNC8 495 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 CEP68Q76N32 757 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 ADHFE1Q8IWW8 467 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 HTRA1Q92743 480 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 PDFQ9HBH1 243 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 ELOVL2Q9NXB9 296 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 ZNF229Q9UJW7 825 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 ANGPTL3Q9Y5C1 460 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 ORC6Q9Y5N6 252 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 COL4A4P53420 1690 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-201ENST00000262395 PATJQ8NI35 1801 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 PRAMEF12O95522 483 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 TACR2P21452 398 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 LPOP22079 712 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-201ENST00000262395 IGFBP5P24593 272 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 MASP1P48740 699 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 TAF1AQ15573 450 aaPredicted RBP17.61■□□□□ 0.41
TRAF4-201ENST00000262395 C6orf183Q5T699 404 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 MICU2Q8IYU8 434 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 MFSD4AQ8N468 514 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 CLDN19Q8N6F1 224 aa17.61■□□□□ 0.41
TRAF4-201ENST00000262395 OR5K1Q8NHB7 308 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms