RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 SVOPLQ8N434 492 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 TTC30BQ8N4P2 665 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 OR5K1Q8NHB7 308 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 RHBDF1Q96CC6 855 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 VPS51Q9UID3 782 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 PADI3Q9ULW8 664 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 ANGPTL3Q9Y5C1 460 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 GBF1Q92538 1859 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 ZNF682O95780 498 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 KCNQ1P51787 676 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 PURAQ00577 322 aaKnown RBP17.13■□□□□ 0.33
TRAM1-201ENST00000262213 TOP3AQ13472 1001 aaPredicted RBP17.13■□□□□ 0.33
TRAM1-201ENST00000262213 NADSYN1Q6IA69 706 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 LRRC8DQ7L1W4 858 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 GALNT10Q86SR1 603 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 SLC22A16Q86VW1 577 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 ZNF513Q8N8E2 541 aaPredicted RBP17.13■□□□□ 0.33
TRAM1-201ENST00000262213 PSMA8Q8TAA3 256 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 PEX13Q92968 403 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 MS4A4AQ96JQ5 239 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 ABCG8Q9H221 673 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 PRG3Q9Y2Y8 225 aaPredicted RBP17.13■□□□□ 0.33
TRAM1-201ENST00000262213 FAM32AQ9Y421 112 aaKnown RBP17.13■□□□□ 0.33
TRAM1-201ENST00000262213 GPC6Q9Y625 555 aaPredicted RBP17.13■□□□□ 0.33
TRAM1-201ENST00000262213 PMF1-BGLAPU3KQ54 211 aa17.13■□□□□ 0.33
TRAM1-201ENST00000262213 COL4A4P53420 1690 aaPredicted RBP17.13■□□□□ 0.33
TRAM1-201ENST00000262213 IGLV3-10A0A075B6K4 115 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 B4GALT3O60512 393 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 SEC22BO75396 215 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 CREG1O75629 220 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 EPOP01588 193 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 S100BP04271 92 aaPredicted RBP17.12■□□□□ 0.33
TRAM1-201ENST00000262213 UGT2B4P06133 528 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 MSH3P20585 1137 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 LAIR1Q6GTX8 287 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 PAGE2Q7Z2X7 111 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 ITPKCQ96DU7 683 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 RDH12Q96NR8 316 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 OR52E6Q96RD3 313 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 EGFL8Q99944 293 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 ADAM2Q99965 735 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 KATNAL1Q9BW62 490 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 YIPF2Q9BWQ6 316 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 DNMT3BQ9UBC3 853 aaKnown RBP17.12■□□□□ 0.33
TRAM1-201ENST00000262213 TMEFF2Q9UIK5 374 aaPredicted RBP17.12■□□□□ 0.33
TRAM1-201ENST00000262213 INTS6Q9UL03 887 aaKnown RBP17.12■□□□□ 0.33
TRAM1-201ENST00000262213 STX7O15400 261 aaKnown RBP17.12■□□□□ 0.33
TRAM1-201ENST00000262213 TLR5O60602 858 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 IGFBP5P24593 272 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 TAF1AQ15573 450 aaPredicted RBP17.12■□□□□ 0.33
TRAM1-201ENST00000262213 DGUOKQ16854 277 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 CES5AQ6NT32 575 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 B3GNT8Q7Z7M8 397 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 MICU2Q8IYU8 434 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 FATE1Q969F0 183 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 FAM120BQ96EK7 910 aaKnown RBP17.12■□□□□ 0.33
TRAM1-201ENST00000262213 SUSD3Q96L08 255 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 RASSF1Q9NS23 344 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 EIF3LQ9Y262 564 aaKnown RBP17.12■□□□□ 0.33
TRAM1-201ENST00000262213 PCDHB14Q9Y5E9 798 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 TDRD15B5MCY1 1934 aaKnown RBP17.12■□□□□ 0.33
TRAM1-201ENST00000262213 PATJQ8NI35 1801 aa17.12■□□□□ 0.33
TRAM1-201ENST00000262213 PGRP06401 933 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 LPOP22079 712 aaPredicted RBP17.11■□□□□ 0.33
TRAM1-201ENST00000262213 THPOP40225 353 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 TAF10Q12962 218 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 KIAA0040Q15053 153 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 CATSPEREQ5SY80 951 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 UTS2BQ765I0 119 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 P2RY8Q86VZ1 359 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 HTRA1Q92743 480 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 CCDC115Q96NT0 180 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 CCSER2Q9H7U1 834 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 SCUBE2Q9NQ36 999 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 USE1Q9NZ43 259 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 GABARAPO95166 117 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 MAGP20916 626 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 TACR2P21452 398 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 GSSP48637 474 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 SLC13A2Q13183 592 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 LDLRAD1Q5T700 205 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 C1QTNF12Q5T7M4 302 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 CYP4Z1Q86W10 505 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 SLC7A5P1Q8MH63 180 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 MFSD4AQ8N468 514 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 AADATQ8N5Z0 425 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 ABCB10Q9NRK6 738 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 PCDHGA10Q9Y5H3 936 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 TTC36A6NLP5 189 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 SEC24AO95486 1093 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 PRLP01236 227 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 MT-ND2P03891 347 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 TTPAP49638 278 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 TPTEP56180 551 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 CCDC92Q53HC0 331 aaPredicted RBP17.11■□□□□ 0.33
TRAM1-201ENST00000262213 GNASQ5JWF2 1037 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 ZNF280BQ86YH2 543 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 ZNF540Q8NDQ6 660 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 S100ZQ8WXG8 99 aa17.11■□□□□ 0.33
TRAM1-201ENST00000262213 UBE2FQ969M7 185 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms