RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 JUNDP17535 347 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 TFEBP19484 476 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 DGKAP23743 735 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 PI4KAP42356 2102 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 OR4D1Q15615 310 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 LCA5Q86VQ0 697 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 SYT12Q8IV01 421 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 FAM174AQ8TBP5 190 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 SCYL1Q96KG9 808 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 WDR37Q9Y2I8 494 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 CFAP20Q9Y6A4 193 aaKnown RBP26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 DGKBQ9Y6T7 804 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 F8W8V4 182 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 TK2O00142 265 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 BTN3A1O00481 513 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 SDC3O75056 442 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 SLCO2B1O94956 709 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 GNSP15586 552 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 OVGP1Q12889 678 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 TSNQ15631 228 aaKnown RBP26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 NRROSQ86YC3 692 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 NKAPQ8N5F7 415 aaKnown RBP26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 PRSS33Q8NF86 280 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 TIMM29Q9BSF4 260 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 PRDM8Q9NQV8 689 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 DNAAF2Q9NVR5 837 aaKnown RBP26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 CIDEBQ9UHD4 219 aa26.88■■□□□ 1.89
SMARCD3-201ENST00000262188 CACNA1HO95180 2353 aa26.87■■□□□ 1.89
SMARCD3-201ENST00000262188 C17orf113A0A1B0GUU1 675 aa26.87■■□□□ 1.89
SMARCD3-201ENST00000262188 DPPA5A6NC42 116 aa26.87■■□□□ 1.89
SMARCD3-201ENST00000262188 CFIP05156 583 aa26.87■■□□□ 1.89
SMARCD3-201ENST00000262188 PRRT3Q5FWE3 981 aa26.87■■□□□ 1.89
SMARCD3-201ENST00000262188 LRRC8EQ6NSJ5 796 aa26.87■■□□□ 1.89
SMARCD3-201ENST00000262188 SFTPA2Q8IWL1 248 aa26.87■■□□□ 1.89
SMARCD3-201ENST00000262188 FSTL5Q8N475 847 aaPredicted RBP26.87■■□□□ 1.89
SMARCD3-201ENST00000262188 DLG3Q92796 817 aa26.87■■□□□ 1.89
SMARCD3-201ENST00000262188 EXT2Q93063 718 aa26.87■■□□□ 1.89
SMARCD3-201ENST00000262188 DERL2Q9GZP9 239 aa26.87■■□□□ 1.89
SMARCD3-201ENST00000262188 VCXQ9H320 206 aa26.87■■□□□ 1.89
SMARCD3-201ENST00000262188 SDAD1Q9NVU7 687 aaKnown RBP eCLIP26.87■■□□□ 1.89
SMARCD3-201ENST00000262188 APOBEC3BQ9UH17 382 aaKnown RBP26.87■■□□□ 1.89
SMARCD3-201ENST00000262188 FANCMQ8IYD8 2048 aa26.87■■□□□ 1.89
SMARCD3-201ENST00000262188 GPR179Q6PRD1 2367 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 KPNA5O15131 536 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 GLRA3O75311 464 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 TCF15Q12870 199 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 FAM83EQ2M2I3 478 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 METRNLQ641Q3 311 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 ISCA2Q86U28 154 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 DCP2Q8IU60 420 aaKnown RBP26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 LRRC61Q9BV99 259 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 XPR1Q9UBH6 696 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 DCDC2Q9UHG0 476 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 PLLPQ9Y342 182 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 DNMT3AQ9Y6K1 912 aaPredicted RBP26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 TMEM131Q92545 1883 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 ZFC3H1O60293 1989 aaKnown RBP26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 H3BM21 787 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 SBK3P0C264 359 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 ACTR1BP42025 376 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 RGS4P49798 205 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 CLCNKAP51800 687 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 ACTR1AP61163 376 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 TAF11Q15544 211 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 AGAP9Q5VTM2 703 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 CPLX4Q7Z7G2 160 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 SLC22A15Q8IZD6 547 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 MYO1HQ8N1T3 1032 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 GLMNQ92990 594 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 ALKBH8Q96BT7 664 aaKnown RBP26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 PPP1R14BQ96C90 147 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 WWP1Q9H0M0 922 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 OR52A5Q9H2C5 316 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 TBC1D29Q9UFV1 150 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 L3MBTL1Q9Y468 752 aa26.86■■□□□ 1.89
SMARCD3-201ENST00000262188 ANKRD12Q6UB98 2062 aa26.85■■□□□ 1.89
SMARCD3-201ENST00000262188 PRR19A6NJB7 356 aa26.85■■□□□ 1.89
SMARCD3-201ENST00000262188 CSF2P04141 144 aa26.85■■□□□ 1.89
SMARCD3-201ENST00000262188 NQO1P15559 274 aaKnown RBP26.85■■□□□ 1.89
SMARCD3-201ENST00000262188 DRD4P21917 467 aa26.85■■□□□ 1.89
SMARCD3-201ENST00000262188 PPP2R2AP63151 447 aa26.85■■□□□ 1.89
SMARCD3-201ENST00000262188 TEAD4Q15561 434 aa26.85■■□□□ 1.89
SMARCD3-201ENST00000262188 TMEM151AQ8N4L1 468 aa26.85■■□□□ 1.89
SMARCD3-201ENST00000262188 TSNARE1Q96NA8 513 aa26.85■■□□□ 1.89
SMARCD3-201ENST00000262188 NMRAL1Q9HBL8 299 aa26.85■■□□□ 1.89
SMARCD3-201ENST00000262188 MKS1Q9NXB0 559 aa26.85■■□□□ 1.89
SMARCD3-201ENST00000262188 UTP6Q9NYH9 597 aaKnown RBP26.85■■□□□ 1.89
SMARCD3-201ENST00000262188 SCHIP1Q9P0W5 487 aaPredicted RBP26.85■■□□□ 1.89
SMARCD3-201ENST00000262188 KLHL42Q9P2K6 505 aa26.85■■□□□ 1.89
SMARCD3-201ENST00000262188 ADAMTS9Q9P2N4 1935 aa26.84■■□□□ 1.89
SMARCD3-201ENST00000262188 PRPF4O43172 522 aaKnown RBP eCLIP26.84■■□□□ 1.89
SMARCD3-201ENST00000262188 COL6A2P12110 1019 aa26.84■■□□□ 1.89
SMARCD3-201ENST00000262188 IL9RQ01113 521 aa26.84■■□□□ 1.89
SMARCD3-201ENST00000262188 DUS1LQ6P1R4 473 aaKnown RBP26.84■■□□□ 1.89
SMARCD3-201ENST00000262188 RMDN2Q96LZ7 410 aa26.84■■□□□ 1.89
SMARCD3-201ENST00000262188 ARRDC1-AS1Q9H2J1 176 aa26.84■■□□□ 1.89
SMARCD3-201ENST00000262188 GRID1Q9ULK0 1009 aa26.84■■□□□ 1.89
SMARCD3-201ENST00000262188 TRBV23OR9-2A0A075B6M9 112 aa26.84■■□□□ 1.89
SMARCD3-201ENST00000262188 SLC34A2O95436 690 aa26.84■■□□□ 1.89
SMARCD3-201ENST00000262188 CTSEP14091 401 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms