RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 METTL6Q8TCB7 284 aa21.84■■□□□ 1.09
SIX3-201ENST00000260653 PRKAB1Q9Y478 270 aa21.84■■□□□ 1.09
SIX3-201ENST00000260653 GGT5P36269 586 aa21.84■■□□□ 1.09
SIX3-201ENST00000260653 HTR6P50406 440 aa21.84■■□□□ 1.09
SIX3-201ENST00000260653 XKR7Q5GH72 579 aa21.84■■□□□ 1.09
SIX3-201ENST00000260653 METTL2BQ6P1Q9 378 aaKnown RBP21.84■■□□□ 1.09
SIX3-201ENST00000260653 XKR5Q6UX68 686 aa21.84■■□□□ 1.09
SIX3-201ENST00000260653 PYCR2Q96C36 320 aa21.84■■□□□ 1.09
SIX3-201ENST00000260653 PLRG1O43660 514 aaKnown RBP21.83■■□□□ 1.09
SIX3-201ENST00000260653 VEGFDO43915 354 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 THRAP10827 490 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 EPB42P16452 691 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 PGM1P36871 562 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 AP1S2P56377 157 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 SQLEQ14534 574 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 EFL1Q7Z2Z2 1120 aaKnown RBP21.83■■□□□ 1.09
SIX3-201ENST00000260653 OR2T11Q8NH01 316 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 RP9Q8TA86 221 aaKnown RBP21.83■■□□□ 1.09
SIX3-201ENST00000260653 FAM131CQ96AQ9 280 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 LRCH3Q96II8 777 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 HBEGFQ99075 208 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 FBRSQ9HAH7 460 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 CIDEBQ9UHD4 219 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.83■■□□□ 1.09
SIX3-201ENST00000260653 SHISA7A6NL88 538 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 CD72P21854 359 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 HNMTP50135 292 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 ADPRHP54922 357 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 CYLC2Q14093 348 aaPredicted RBP21.83■■□□□ 1.09
SIX3-201ENST00000260653 IRF4Q15306 451 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 PTCHD3Q3KNS1 767 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 CCSMST1Q4G0I0 132 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 DNAL1Q4LDG9 190 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 GK5Q6ZS86 529 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 TRMT11Q7Z4G4 463 aaKnown RBP21.83■■□□□ 1.09
SIX3-201ENST00000260653 PARP9Q8IXQ6 854 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 RPLP0P6Q8NHW5 317 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 ZNF514Q96K75 400 aaPredicted RBP21.83■■□□□ 1.09
SIX3-201ENST00000260653 SLC32A1Q9H598 525 aa21.83■■□□□ 1.09
SIX3-201ENST00000260653 H3BM21 787 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 POP7O75817 140 aaKnown RBP21.82■■□□□ 1.08
SIX3-201ENST00000260653 HGFP14210 728 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 EPORP19235 508 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 BDKRB1P46663 353 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 SLC6A12P48065 614 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 CDC16Q13042 620 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 INPP5AQ14642 412 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 AGERQ15109 404 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 C11orf96Q7Z7L8 435 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 TCAIMQ8N3R3 496 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 PHF7Q9BWX1 381 aaPredicted RBP21.82■■□□□ 1.08
SIX3-201ENST00000260653 ATG10Q9H0Y0 220 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 GPR34Q9UPC5 381 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 OR1A2Q9Y585 309 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 A0A1W2PQU0 124 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 LIN7AO14910 233 aaPredicted RBP21.82■■□□□ 1.08
SIX3-201ENST00000260653 RPS21P63220 83 aaKnown RBP21.82■■□□□ 1.08
SIX3-201ENST00000260653 MRPS21P82921 87 aaKnown RBP21.82■■□□□ 1.08
SIX3-201ENST00000260653 PACS2Q86VP3 889 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 CLPTM1LQ96KA5 538 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 LINC00615Q96LM1 132 aaPredicted RBP21.82■■□□□ 1.08
SIX3-201ENST00000260653 RTKNQ9BST9 563 aa21.82■■□□□ 1.08
SIX3-201ENST00000260653 A0A1W2PPC1 479 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 PEX11AO75192 247 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 WDR47O94967 919 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 LBPP18428 481 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 MAP4P27816 1152 aaKnown RBP21.81■■□□□ 1.08
SIX3-201ENST00000260653 PIK3CGP48736 1102 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 FASTKQ14296 549 aaKnown RBP21.81■■□□□ 1.08
SIX3-201ENST00000260653 NFE2L1Q14494 772 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 HERC3Q15034 1050 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 TP53I13Q8NBR0 393 aaPredicted RBP21.81■■□□□ 1.08
SIX3-201ENST00000260653 OR9I1Q8NGQ6 314 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 SIPA1Q96FS4 1042 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 THTPAQ9BU02 230 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 NTMT1Q9BV86 223 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 RNF11Q9Y3C5 154 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 LOC730098B7Z3J9 87 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 PSMD12O00232 456 aaPredicted RBP21.81■■□□□ 1.08
SIX3-201ENST00000260653 EZRP15311 586 aaKnown RBP21.81■■□□□ 1.08
SIX3-201ENST00000260653 ITGAXP20702 1163 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 HMOX2P30519 316 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 PTK2BQ14289 1009 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 TMEM259Q4ZIN3 620 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 IL27RAQ6UWB1 636 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 LRRC70Q7Z2Q7 622 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 MYLK4Q86YV6 388 aaPredicted RBP21.81■■□□□ 1.08
SIX3-201ENST00000260653 C1QTNF2Q9BXJ5 285 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 CD93Q9NPY3 652 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 CCDC167Q9P0B6 97 aa21.81■■□□□ 1.08
SIX3-201ENST00000260653 FFAR3O14843 346 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 AIM2O14862 343 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 GPR42O15529 346 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 VPS4BO75351 444 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 CATP04040 527 aaKnown RBP21.8■■□□□ 1.08
SIX3-201ENST00000260653 PRR35P0CG20 571 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 AGKQ53H12 422 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 NEK5Q6P3R8 708 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 TMEM92Q6UXU6 159 aa21.8■■□□□ 1.08
SIX3-201ENST00000260653 FAM124AQ86V42 546 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms