RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 RIPOR3Q96MK2 946 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 PPM1HQ9ULR3 514 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 GOLGA4Q13439 2230 aaKnown RBP18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 RIIAD1A6NNX1 92 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 CXorf49A8MYA2 514 aaPredicted RBP18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 TMEM233B4DJY2 109 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 RGS20O76081 388 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 RPS9P46781 194 aaKnown RBP18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 NCBP2P52298 156 aaKnown RBP eCLIP18.38■□□□□ 0.539e-26■■□□□ 13.3
SMARCC1-201ENST00000254480 ARFIP1P53367 373 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 CARD16Q5EG05 197 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 FBXL22Q6P050 247 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 TMPRSS11AQ6ZMR5 421 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 AMZ2Q86W34 360 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 CROCCP3Q8IVE0 287 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 TRPS1Q9UHF7 1281 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 ARHGEF33A8MVX0 844 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 CXCR6O00574 342 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 PPP1R8Q12972 351 aaKnown RBP18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 ZNF846Q147U1 533 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 PRR23BQ6ZRT6 265 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 ZNF304Q9HCX3 659 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 TXNRD2Q9NNW7 524 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 CNTN6Q9UQ52 1028 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 WASF2Q9Y6W5 498 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 DPYSQ14117 519 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 LRRC32Q14392 662 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 TRIM63Q969Q1 353 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 TVP23BQ9NYZ1 205 aa18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 RBMX2Q9Y388 322 aaKnown RBP18.38■□□□□ 0.53
SMARCC1-201ENST00000254480 PTNP21246 168 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 KHDC1Q4VXA5 237 aaKnown RBP18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 OR10H4Q8NGA5 316 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 SETD6Q8TBK2 473 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 AMBNQ9NP70 447 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 CCNB1IP1Q9NPC3 277 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 DMAC2Q9NW81 257 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 IL36AQ9UHA7 158 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 ZNF180Q9UJW8 692 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 PLAGL1Q9UM63 463 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 IRAK3Q9Y616 596 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 WNT6Q9Y6F9 365 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 MRC1P22897 1456 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 IRAK2O43187 625 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 GALK1P51570 392 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 RPS14P62263 151 aaKnown RBP18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 ECT2LQ008S8 904 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 NCBP2-AS2Q69YL0 99 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 GPR153Q6NV75 609 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 SLC38A4Q969I6 547 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 CDH7Q9ULB5 785 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 ERVK-11Q9UQG0 969 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 INMTO95050 263 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 ESR1P03372 595 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 NFKB2Q00653 900 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 LAPTM5Q13571 262 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 TSC22D1Q15714 1073 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 RFTN2Q52LD8 501 aaPredicted RBP18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 SIRPB2Q5JXA9 342 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 ERICH5Q6P6B1 374 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 ZDHHC21Q8IVQ6 265 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 DIRAS2Q96HU8 199 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 C1orf109Q9NX04 203 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 TLR6Q9Y2C9 796 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 E7ENX8 843 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 PJA1Q8NG27 643 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 GRHL3Q8TE85 626 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 SLC25A36Q96CQ1 311 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 SLC35G5Q96KT7 338 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 SMPD3Q9NY59 655 aaPredicted RBP18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 YIPF1Q9Y548 306 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 CA12O43570 354 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 OPN1SWP03999 348 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 IFNA6P05013 189 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 MYBPC3Q14896 1274 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 TMEM145Q8NBT3 493 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 SRFBP1Q8NEF9 429 aaKnown RBP18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 CKLFQ9UBR5 152 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 MED31Q9Y3C7 131 aa18.37■□□□□ 0.53
SMARCC1-201ENST00000254480 A0A0J9YVX5 310 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 TOR1BO14657 336 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 GBAP04062 536 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 GKP32189 559 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 DNASE1L1P49184 302 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 CLEC12AQ5QGZ9 265 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 TTC29Q8NA56 475 aaPredicted RBP18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 SLC39A3Q9BRY0 314 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 KCNN2Q9H2S1 579 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 ZNF395Q9H8N7 513 aaPredicted RBP18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 MTRRQ9UBK8 725 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 B3GALT2O43825 422 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 BDKRB1P46663 353 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 JAG1P78504 1218 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 PRR5P85299 388 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 PTPRCAPQ14761 206 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 CHRNA6Q15825 494 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 MBLAC2Q68D91 279 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 CMTM8Q8IZV2 173 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 OR10Q1Q8NGQ4 319 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 BNIP1Q12981 228 aa18.36■□□□□ 0.53
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