RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 SULT2A1Q06520 285 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 SLC3A1Q07837 685 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 SLC26A9Q7LBE3 791 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 VSIG10LQ86VR7 867 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 OR2L3Q8NG85 312 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 ZNF354BQ96LW1 612 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 CDK5RAP1Q96SZ6 601 aaKnown RBP12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 DPCDQ9BVM2 203 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 BEX2Q9BXY8 128 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 PCDHGA4Q9Y5G9 962 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 KNDC1Q76NI1 1749 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 ITGA10O75578 1167 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 CDRT1O95170 752 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 ERBB2P04626 1255 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 POU2F1P14859 743 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 NUMBP49757 651 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 NKX2-5P52952 324 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 MANFP55145 182 aaKnown RBP12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 ZMYND11Q15326 602 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 IL17AQ16552 155 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 TSTQ16762 297 aaKnown RBP12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 UGT8Q16880 541 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 C3orf58Q8NDZ4 430 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 CSGALNACT1Q8TDX6 532 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 CORO1BQ9BR76 489 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 FOLH1BQ9HBA9 442 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 ZNF490Q9ULM2 529 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 ANKRD63C9JTQ0 380 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 CALCAP01258 141 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 SAGP10523 405 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 CCR10P46092 362 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 PLA2G4EQ3MJ16 856 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 MOB2Q70IA6 237 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 ZSCAN1Q8NBB4 408 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 ATAD1Q8NBU5 361 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 NKX2-3Q8TAU0 364 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 GPER1Q99527 375 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 TMEM5Q9Y2B1 443 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 TRPV2Q9Y5S1 764 aa12.95□□□□□ -0.34
PCDHGA3-201ENST00000253812 LOC100509620A0A075B734 347 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 GPR1P46091 355 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 CLCQ05315 142 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 CYP1B1Q16678 543 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 DRICH1Q6PGQ1 229 aaPredicted RBP12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 AGMOQ6ZNB7 445 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 CATSPERGQ6ZRH7 1159 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 OR4L1Q8NH43 312 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 PPP1R13LQ8WUF5 828 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 SLC13A3Q8WWT9 602 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 FEM1CQ96JP0 617 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 ARL5BQ96KC2 179 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 FAM84AQ96KN4 292 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 ZSWIM3Q96MP5 696 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 NUSAP1Q9BXS6 441 aaKnown RBP12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 ENAMQ9NRM1 1142 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 B8ZZF3 427 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 H3BNH8 94 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 CDKN2CP42773 168 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 MAGEA6P43360 314 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 NRG3P56975 720 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 FADDQ13158 208 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 HECTD2Q5U5R9 776 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 TATDN1Q6P1N9 297 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 FAM35AQ86V20 835 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 DEDD2Q8WXF8 326 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 MAELQ96JY0 434 aaKnown RBP12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 MIPEPQ99797 713 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 WDR18Q9BV38 432 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 POLR2J3Q9H1A7 115 aaKnown RBP12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 COQ3Q9NZJ6 369 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 CPSF4LA6NMK7 179 aaKnown RBP12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 TISP43B9A030 160 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 NUAK1O60285 661 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 MBL2P11226 248 aaPredicted RBP12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 MTHFD1P11586 935 aaKnown RBP12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 AP1S1P61966 158 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 GRM3Q14832 879 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 TOR1AIP1Q5JTV8 583 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 BRMS1LQ5PSV4 323 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 C1orf186Q6ZWK4 172 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 RAB11FIP2Q7L804 512 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 COMMD7Q86VX2 200 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 KLHL36Q8N4N3 616 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 SLC39A8Q9C0K1 460 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 PLEKHA6Q9Y2H5 1048 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 A0A1B0GVC2 190 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 PSMD10O75832 226 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 PRPS2P11908 318 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 AIMP2Q13155 320 aaKnown RBP12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 CCDC58Q4VC31 144 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 PAN2Q504Q3 1202 aaKnown RBP12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 ZC3H12AQ5D1E8 599 aaKnown RBP12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 NCEH1Q6PIU2 408 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 SNX20Q7Z614 316 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 HID1Q8IV36 788 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 REPS2Q8NFH8 660 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 IL31RAQ8NI17 732 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 PIGXQ8TBF5 258 aa12.94□□□□□ -0.34
PCDHGA3-201ENST00000253812 HNRNPABQ99729 332 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms