RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 NXNL2Q5VZ03 156 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 TRIQKQ629K1 86 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 PTRHD1Q6GMV3 140 aaKnown RBP13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 ZNF782Q6ZMW2 699 aaPredicted RBP13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 CREB3L2Q70SY1 520 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 TAF8Q7Z7C8 310 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 SLC9A9Q8IVB4 645 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 STX19Q8N4C7 294 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 CNTD1Q8N815 330 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 LPCAT1Q8NF37 534 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 GPRASP2Q96D09 838 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 PGAP3Q96FM1 320 aaPredicted RBP13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 MRPL48Q96GC5 212 aaKnown RBP13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 C10orf90Q96M02 699 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 MUC13Q9H3R2 512 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 ACTL8Q9H568 366 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 REEP4Q9H6H4 257 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 SCN3BQ9NY72 215 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 PARP4Q9UKK3 1724 aaKnown RBP13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 ROBO3Q96MS0 1386 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 SIPA1L3O60292 1781 aaPredicted RBP13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 C1orf196B1AJZ1 125 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 NEDD8-MDP1E9PL57 170 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 C8BP07358 591 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 GJB1P08034 283 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 TPH1P17752 444 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 CAPN3P20807 821 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 RORAP35398 523 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 RAB5BP61020 215 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 HIF1AQ16665 826 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 ZSWIM7Q19AV6 140 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 FAXCQ5TGI0 409 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 MLIPQ5VWP3 458 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 MSANTD2Q6P1R3 559 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 TMEM88Q6PEY1 159 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 OR2L5Q8NG80 312 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 OR52K2Q8NGK3 314 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 C7orf50Q9BRJ6 194 aaKnown RBP13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 ZNF302Q9NR11 478 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 SEMA3GQ9NS98 782 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 ACOXLQ9NUZ1 547 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 USE1Q9NZ43 259 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 COL20A1Q9P218 1284 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 SLC23A1Q9UHI7 598 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 MTF2Q9Y483 593 aaPredicted RBP13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 N4BP2Q86UW6 1770 aaPredicted RBP13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 NUP188Q5SRE5 1749 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 NDUFA2O43678 99 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 IL18RAPO95256 599 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 CBX7O95931 251 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 PRKAR1AP10644 381 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 RAB33AQ14088 237 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 SYT16Q17RD7 645 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 RAB11FIP2Q7L804 512 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 ZBTB8OSQ8IWT0 167 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 C8orf59Q8N0T1 100 aaPredicted RBP13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 KLHL36Q8N4N3 616 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 RDM1Q8NG50 284 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 GMCL1Q96IK5 515 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 RHOVQ96L33 236 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 SERPINB11Q96P15 392 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 C11orf84Q9BUA3 381 aaPredicted RBP13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 MENTQ9BUN1 341 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 NRBP2Q9NSY0 501 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 SMOXQ9NWM0 555 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 SPASTQ9UBP0 616 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 ZNF223Q9UK11 482 aaPredicted RBP13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 CLCA3PQ9Y6N3 262 aa13.15□□□□□ -0.3
COLGALT1-201ENST00000252599 COL4A1P02462 1669 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 GMFGO60234 142 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 ABCB7O75027 752 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 TOXO94900 526 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 AP2A1O95782 977 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 GATMP50440 423 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 SLC7A2P52569 658 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 BMPR2Q13873 1038 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 ZNF235Q14590 738 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 MFSD13AQ14CX5 517 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 RPS6KA2Q15349 733 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 GRK1Q15835 563 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 FASTKD1Q53R41 847 aaKnown RBP13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 CCDC157Q569K6 752 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 ZNF57Q68EA5 555 aaPredicted RBP13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 ANKRD54Q6NXT1 300 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 PAPD4Q6PIY7 484 aaKnown RBP13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 S100A7AQ86SG5 101 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 EMC1Q8N766 993 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 OR52K1Q8NGK4 314 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 TRMT2BQ96GJ1 504 aaKnown RBP13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 C5orf34Q96MH7 638 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 KREMEN1Q96MU8 473 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 NPAS1Q99742 590 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 PDCD2LQ9BRP1 358 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 ITGA11Q9UKX5 1188 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 LRP6O75581 1613 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 CYB561D2O14569 222 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 HPGDSO60760 199 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 RPS17P08708 135 aaKnown RBP13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 PDGFRAP16234 1089 aa13.14□□□□□ -0.31
COLGALT1-201ENST00000252599 CREMQ03060 361 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms