RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 SETMARQ53H47 684 aaPredicted RBP16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 HENMT1Q5T8I9 393 aaKnown RBP16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 RAET1GQ6H3X3 334 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 MRNIPQ6NTE8 343 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 TRIM74Q86UV6 250 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 SERPINA9Q86WD7 417 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 EXT2Q93063 718 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 FUBP1Q96AE4 644 aaKnown RBP16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 TRMOQ9BU70 441 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 UTP6Q9NYH9 597 aaKnown RBP16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 PDP2Q9P2J9 529 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 CRLS1Q9UJA2 301 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 KNL1Q8NG31 2342 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 UBA6A0AVT1 1052 aaPredicted RBP16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 PSMD11O00231 422 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 FBP2O00757 339 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 GPC4O75487 556 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 ITGALP20701 1170 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 CCR3P51677 355 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 CDH13P55290 713 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 MED21Q13503 144 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 PTK2BQ14289 1009 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 OR4D1Q15615 310 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 WSCD2Q2TBF2 565 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 ZNF284Q2VY69 593 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 SNX20Q7Z614 316 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 HORMAD1Q86X24 394 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 PLEKHG4BQ96PX9 1271 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 SLC17A9Q9BYT1 436 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 SLC24A3Q9HC58 644 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 CCDC167Q9P0B6 97 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 DTNAQ9Y4J8 743 aa16.62■□□□□ 0.25
CDKN1A-201ENST00000244741 IGHV1OR15-9A0A0B4J2B8 117 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 ATP6AP2A0A1C7CYW4 349 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 PPP6CO00743 305 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 ATP6AP2O75787 350 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 PEX19P40855 299 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 HERVK_113P63132 956 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 NFKB2Q00653 900 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 PDAP1Q13442 181 aaKnown RBP16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 LRP8Q14114 963 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 UGT3A2Q3SY77 523 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 MMEL1Q495T6 779 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 TMEM259Q4ZIN3 620 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 ZFP1Q6P2D0 407 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 LILRA2Q8N149 483 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 PTGR2Q8N8N7 351 aaPredicted RBP16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 C3orf30Q96M34 536 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 ERVK-6Q9BXR3 956 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 ADA2Q9NZK5 511 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 LRRC14BA6NHZ5 514 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 E7ENX8 843 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 H3BMM5 538 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 TRIM38O00635 465 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 SMIM24O75264 130 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 SIX3O95343 332 aaPredicted RBP16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 SOD1P00441 154 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 CD6P30203 668 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 GPR1P46091 355 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 SH3BP2P78314 561 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 SFSWAPQ12872 951 aaKnown RBP16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 STX5Q13190 355 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 REP15Q6BDI9 236 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 LARP4Q71RC2 724 aaKnown RBP eCLIP16.61■□□□□ 0.253e-8■■□□□ 12.3
CDKN1A-201ENST00000244741 DET1Q7L5Y6 550 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 CLDN19Q8N6F1 224 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 ICA1LQ8NDH6 482 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 OR2T34Q8NGX1 318 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 SNX19Q92543 992 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 COPS7BQ9H9Q2 264 aaPredicted RBP16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 PREBQ9HCU5 417 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 WSB2Q9NYS7 404 aaPredicted RBP16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 BCAP29Q9UHQ4 241 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 MBD1Q9UIS9 605 aaPredicted RBP16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 RIMS3Q9UJD0 308 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 OR1A2Q9Y585 309 aa16.61■□□□□ 0.25
CDKN1A-201ENST00000244741 LRRC72A6NJI9 287 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 UBXN8O00124 270 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 AXIN1O15169 862 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 NDUFS3O75489 264 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 C7P10643 843 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 ZNF37AP17032 561 aaPredicted RBP16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 FMO4P31512 558 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 CLDN2P57739 230 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 FOLH1Q04609 750 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 IRF4Q15306 451 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 PAOXQ6QHF9 649 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 NRSN1Q8IZ57 195 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 CAMKK1Q8N5S9 505 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 DCUN1D1Q96GG9 259 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 LRGUKQ96M69 825 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 AARSD1Q9BTE6 412 aaKnown RBP16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 C1QTNF2Q9BXJ5 285 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 SGK2Q9HBY8 427 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 H0Y8X5 98 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 SNRPB2P08579 225 aaKnown RBP16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 MTHFD2P13995 350 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 FNTBP49356 437 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 INPP5AQ14642 412 aa16.6■□□□□ 0.25
CDKN1A-201ENST00000244741 MAPRE2Q15555 327 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms