RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 ITFG2Q969R8 447 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 SOHLH2Q9NX45 425 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 CFAP20Q9Y6A4 193 aaKnown RBP7.4□□□□□ -1.22
RIF1-201ENST00000243326 SOCS7O14512 581 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 MRPL3P09001 348 aaKnown RBP7.4□□□□□ -1.22
RIF1-201ENST00000243326 HYAL2Q12891 473 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 LIN54Q6MZP7 749 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 IQCHQ86VS3 1027 aa7.4□□□□□ -1.22
RIF1-201ENST00000243326 MYH6P13533 1939 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 A0A1B0GVT2 93 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 ABLIM1O14639 778 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 CATP04040 527 aaKnown RBP7.4□□□□□ -1.23
RIF1-201ENST00000243326 SLC25A52Q3SY17 297 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 OR8S1Q8NH09 359 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 NDNFQ8TB73 568 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 MAU2Q9Y6X3 613 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.4□□□□□ -1.231e-6■■■■■ 44.1
RIF1-201ENST00000243326 RPP40O75818 363 aaKnown RBP7.4□□□□□ -1.23
RIF1-201ENST00000243326 GPR1P46091 355 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 MLLT1Q03111 559 aaPredicted RBP7.4□□□□□ -1.23
RIF1-201ENST00000243326 ZPBP2Q6X784 338 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 CXXC1Q9P0U4 656 aaPredicted RBP7.4□□□□□ -1.23
RIF1-201ENST00000243326 KIAA1522Q9P206 1035 aaPredicted RBP7.4□□□□□ -1.23
RIF1-201ENST00000243326 OR10H1Q9Y4A9 318 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 DOCK8Q8NF50 2099 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 DHFRP00374 187 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 TGFBR2P37173 567 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 MAGEA12P43365 314 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 ARCN1P48444 511 aaKnown RBP7.4□□□□□ -1.23
RIF1-201ENST00000243326 CD97P48960 835 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 TDGQ13569 410 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 DACT2Q5SW24 774 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 CAND1Q86VP6 1230 aaKnown RBP7.4□□□□□ -1.23
RIF1-201ENST00000243326 MIPEPQ99797 713 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 CLCA3PQ9Y6N3 262 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 A0A0J9YVX5 310 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 MYBPHLA2RUH7 354 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 STX16O14662 325 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 POLR2EP19388 210 aaKnown RBP7.4□□□□□ -1.23
RIF1-201ENST00000243326 IFNGR2P38484 337 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 LRRC38Q5VT99 294 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 CHSY3Q70JA7 882 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 PRSS58Q8IYP2 241 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 CPNE2Q96FN4 548 aaPredicted RBP7.4□□□□□ -1.23
RIF1-201ENST00000243326 SEC14L3Q9UDX4 400 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 PRICKLE3O43900 615 aaPredicted RBP7.4□□□□□ -1.23
RIF1-201ENST00000243326 SSX5O60225 188 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 MITFO75030 526 aaPredicted RBP7.4□□□□□ -1.23
RIF1-201ENST00000243326 SAGP10523 405 aaPredicted RBP7.4□□□□□ -1.23
RIF1-201ENST00000243326 PRKAR2AP13861 404 aaKnown RBP7.4□□□□□ -1.23
RIF1-201ENST00000243326 CREMQ03060 361 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 SOWAHAQ2M3V2 549 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 CXXC5Q7LFL8 322 aaKnown RBP7.4□□□□□ -1.23
RIF1-201ENST00000243326 MAB21L3Q8N8X9 362 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 ZNF717Q9BY31 904 aaPredicted RBP7.4□□□□□ -1.23
RIF1-201ENST00000243326 MGAT4BQ9UQ53 548 aa7.4□□□□□ -1.23
RIF1-201ENST00000243326 NME6O75414 186 aaPredicted RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 GADD45GO95257 159 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 C14orf80Q86SX3 495 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 NRG4Q8WWG1 115 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 AURKBQ96GD4 344 aaPredicted RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 ST3GAL5Q9UNP4 418 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 GPR25O00155 361 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 TNFSF12O43508 249 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 MATN4O95460 622 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 TSHRP16473 764 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 LRRC37A5PQ49AS3 106 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 HECTD3Q5T447 861 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 CFAP206Q8IYR0 622 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 MYO19Q96H55 970 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 SUCOQ9UBS9 1254 aaKnown RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 NCKAP1Q9Y2A7 1128 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 SDK2Q58EX2 2172 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 J3QLW9 94 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 M0R036 132 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 ZNF19P17023 458 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 GRB7Q14451 532 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 TEX44Q53QW1 395 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 SLC35F1Q5T1Q4 408 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 SLC26A9Q7LBE3 791 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 TAC4Q86UU9 113 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 SLC15A4Q8N697 577 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 NFKBIDQ8NI38 313 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 MRPL48Q96GC5 212 aaKnown RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 NSUN5Q96P11 429 aaKnown RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 EMILIN2Q9BXX0 1053 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 ASF1AQ9Y294 204 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 MATN2O00339 956 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 PDPK1O15530 556 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 TPSB2P20231 275 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 MNDAP41218 407 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 HTR2BP41595 481 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 TPSAB1Q15661 275 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 NIPAL1Q6NVV3 410 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 HERPUD2Q9BSE4 406 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 CCDC106Q9BWC9 280 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 DTLQ9NZJ0 730 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 MYH13Q9UKX3 1938 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 GTPBP1O00178 669 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms