RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 SELENOMQ8WWX9 145 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 CLIP3Q96DZ5 547 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 DMRTB1Q96MA1 342 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 NODALQ96S42 347 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 WRAP53Q9BUR4 548 aaKnown RBP10.81□□□□□ -0.68
COPA-201ENST00000241704 CCSER2Q9H7U1 834 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 PDE10AQ9Y233 779 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 HS3ST4Q9Y661 456 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 TRBV23OR9-2A0A075B6M9 112 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 SEMA3DO95025 777 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 NUDT14O95848 222 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 CFIP05156 583 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 MYCLP1P12525 358 aaPredicted RBP10.81□□□□□ -0.68
COPA-201ENST00000241704 ATF4P18848 351 aaPredicted RBP10.81□□□□□ -0.68
COPA-201ENST00000241704 PRKCHP24723 683 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 GATMP50440 423 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 HLCSP50747 726 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 RPS24P62847 133 aaKnown RBP10.81□□□□□ -0.68
COPA-201ENST00000241704 ZNF33AQ06730 810 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 GPRIN3Q6ZVF9 776 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 DCP2Q8IU60 420 aaKnown RBP10.81□□□□□ -0.68
COPA-201ENST00000241704 CELF5Q8N6W0 485 aaKnown RBP10.81□□□□□ -0.68
COPA-201ENST00000241704 SPERTQ8NA61 448 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 LRRC20Q8TCA0 184 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 COL26A1Q96A83 441 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 IGSF21Q96ID5 467 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 ACAT2Q9BWD1 397 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 GATA5Q9BWX5 397 aaPredicted RBP10.81□□□□□ -0.68
COPA-201ENST00000241704 ZNF717Q9BY31 904 aaPredicted RBP10.81□□□□□ -0.68
COPA-201ENST00000241704 DPEP2Q9H4A9 486 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 FAM83DQ9H4H8 585 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 TDP1Q9NUW8 608 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 SMOXQ9NWM0 555 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 RAPGEFL1Q9UHV5 662 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 OAZ3Q9UMX2 235 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 RNF11Q9Y3C5 154 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 SPO11Q9Y5K1 396 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 KCNE2Q9Y6J6 123 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 PMF1-BGLAPU3KQ54 211 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 GLYATL1P3A0A0U1RQE8 302 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 MTMR11A4FU01 709 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 URADA6NGE7 173 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 A8MU76 341 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 SULT1C4O75897 302 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 IPO13O94829 963 aaKnown RBP10.81□□□□□ -0.68
COPA-201ENST00000241704 RASGRP1O95267 797 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 HAPLN1P10915 354 aaPredicted RBP10.81□□□□□ -0.68
COPA-201ENST00000241704 DBTP11182 482 aaKnown RBP10.81□□□□□ -0.68
COPA-201ENST00000241704 TSPAN8P19075 237 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 GRIA1P42261 906 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 MS4A2Q01362 244 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 TIFABQ6ZNK6 161 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 CHMP1BQ7LBR1 199 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 RAB43Q86YS6 212 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 SH3YL1Q96HL8 342 aaPredicted RBP10.81□□□□□ -0.68
COPA-201ENST00000241704 HOPXQ9BPY8 73 aaPredicted RBP10.81□□□□□ -0.68
COPA-201ENST00000241704 OLAHQ9NV23 265 aa10.81□□□□□ -0.68
COPA-201ENST00000241704 AQP12BA6NM10 295 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 FAM20BO75063 409 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 ULK1O75385 1050 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 OTCP00480 354 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 KCNA5P22460 613 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 CDH13P55290 713 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 ALDH6A1Q02252 535 aaKnown RBP10.8□□□□□ -0.68
COPA-201ENST00000241704 GALNT2Q10471 571 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 PCLAFQ15004 111 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 RP1L1Q8IWN7 2480 aaPredicted RBP10.8□□□□□ -0.68
COPA-201ENST00000241704 AQP12AQ8IXF9 295 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 ANKFN1Q8N957 763 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 MIOSQ9NXC5 875 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 SNX6Q9UNH7 406 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 TTC34A8MYJ7 566 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 PTGESO14684 152 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 HS6ST1O60243 411 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 PRKD3O94806 890 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 CLIC3O95833 236 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 IFNA14P01570 189 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 GALTP07902 379 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 GTF2E2P29084 291 aaKnown RBP10.8□□□□□ -0.68
COPA-201ENST00000241704 TIE1P35590 1138 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 TM4SF4P48230 202 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 C1QTNF8P60827 252 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 RPS3AP61247 264 aaKnown RBP10.8□□□□□ -0.68
COPA-201ENST00000241704 SMUG1Q53HV7 270 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 ARL13AQ5H913 290 aaPredicted RBP10.8□□□□□ -0.68
COPA-201ENST00000241704 C14orf80Q86SX3 495 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 PARGQ86W56 976 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 UNC5BQ8IZJ1 945 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 CADM3Q8N126 398 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 ZNF276Q8N554 614 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 FAR1Q8WVX9 515 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 TMEM246Q9BRR3 403 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 ELAC1Q9H777 363 aaKnown RBP10.8□□□□□ -0.68
COPA-201ENST00000241704 TOR4AQ9NXH8 423 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 TRAF6Q9Y4K3 522 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 PCDHGA3Q9Y5H0 932 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 C7orf72A4D263 438 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 ZNF99A8MXY4 864 aaPredicted RBP10.8□□□□□ -0.68
COPA-201ENST00000241704 THRBP10828 461 aa10.8□□□□□ -0.68
COPA-201ENST00000241704 SLC16A1P53985 500 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms