RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 RPL38P63173 70 aaKnown RBP15.83■□□□□ 0.12
UBE3D-201ENST00000237186 HTRA4P83105 476 aaPredicted RBP15.83■□□□□ 0.12
UBE3D-201ENST00000237186 GLYATQ6IB77 296 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 LRRC70Q7Z2Q7 622 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 RGL4Q8IZJ4 473 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 METTL25Q8N6Q8 603 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 SLC13A3Q8WWT9 602 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 ASB11Q8WXH4 323 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 GTF2H4Q92759 462 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 CLP1Q92989 425 aaKnown RBP15.83■□□□□ 0.12
UBE3D-201ENST00000237186 ZBTB18Q99592 522 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 PARVBQ9HBI1 364 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 LRTM1Q9HBL6 345 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 B4GALT6Q9UBX8 382 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 SLCO3A1Q9UIG8 710 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 TMPRSS11EQ9UL52 423 aa15.83■□□□□ 0.12
UBE3D-201ENST00000237186 ZNF490Q9ULM2 529 aaPredicted RBP15.83■□□□□ 0.12
UBE3D-201ENST00000237186 SAC3D1A6NKF1 404 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 NPIPB8E9PQR5 432 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 KIAA0355O15063 1070 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 KCNH1O95259 989 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 KRT6AP02538 564 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 KRT6BP04259 564 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 UGT2B4P06133 528 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 NCK1P16333 377 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 ZNF30P17039 623 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 CA8P35219 290 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 KRT6CP48668 564 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 DGKQP52824 942 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 SH3BGRP55822 239 aaPredicted RBP15.82■□□□□ 0.12
UBE3D-201ENST00000237186 ARHGEF7Q14155 803 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 NADK2Q4G0N4 442 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 PLEKHS1Q5SXH7 462 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 CACHD1Q5VU97 1274 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 BRAT1Q6PJG6 821 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 GDPD4Q6W3E5 623 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 RFLNAQ6ZTI6 216 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 KIAA0907Q7Z7F0 614 aaPredicted RBP15.82■□□□□ 0.12
UBE3D-201ENST00000237186 HM13Q8TCT9 377 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 IRF7Q92985 503 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 NSMCE2Q96MF7 247 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 PPM1MQ96MI6 270 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 CCDC115Q96NT0 180 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 RBM38Q9H0Z9 239 aaKnown RBP15.82■□□□□ 0.12
UBE3D-201ENST00000237186 CLMPQ9H6B4 373 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 KLQ9UEF7 1012 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 SCN8AQ9UQD0 1980 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 GFYI3L273 518 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 FFAR3O14843 346 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 GPR42O15529 346 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 TULP3O75386 442 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 PRPH2P23942 346 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 AKT1P31749 480 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 SLC6A12P48065 614 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 SEMG2Q02383 582 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 SP140Q13342 867 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 PTGR1Q14914 329 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 SLC5A9Q2M3M2 681 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 HABP4Q5JVS0 413 aaKnown RBP15.82■□□□□ 0.12
UBE3D-201ENST00000237186 CWF19L1Q69YN2 538 aaKnown RBP15.82■□□□□ 0.12
UBE3D-201ENST00000237186 NECAB2Q7Z6G3 386 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 RASGRP3Q8IV61 690 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 RIMKLAQ8IXN7 391 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 KLHL23Q8NBE8 558 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 OR2A12Q8NGT7 310 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 DNAJB8Q8NHS0 232 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 BPIFB1Q8TDL5 484 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 SLC22A17Q8WUG5 538 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 ZNF583Q96ND8 569 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 HAUS8Q9BT25 410 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 ZDHHC6Q9H6R6 413 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 GORASP2Q9H8Y8 452 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 FARSBQ9NSD9 589 aaKnown RBP15.82■□□□□ 0.12
UBE3D-201ENST00000237186 C1orf109Q9NX04 203 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 ARL15Q9NXU5 204 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 PKD2L2Q9NZM6 624 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 PCDH10Q9P2E7 1040 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 MYRFQ9Y2G1 1151 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 AP3M1Q9Y2T2 418 aa15.82■□□□□ 0.12
UBE3D-201ENST00000237186 SERTM1A2A2V5 107 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 EME2A4GXA9 379 aaPredicted RBP15.81■□□□□ 0.12
UBE3D-201ENST00000237186 FAM149AA5PLN7 773 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 KPNA5O15131 536 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 VILLO15195 856 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 CCL16O15467 120 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 MOSPD3O75425 235 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 OR6B1O95007 311 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 CDH1P12830 882 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 ATP1B2P14415 290 aaPredicted RBP15.81■□□□□ 0.12
UBE3D-201ENST00000237186 GGT1P19440 569 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 MYF6P23409 242 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 DCDC1P59894 354 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 TUBA4AP68366 448 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 HMGCS1Q01581 520 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 MERTKQ12866 999 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 SELPLGQ14242 412 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 AAK1Q2M2I8 961 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 ZXDCQ2QGD7 858 aaPredicted RBP15.81■□□□□ 0.12
UBE3D-201ENST00000237186 SLC36A3Q495N2 470 aa15.81■□□□□ 0.12
UBE3D-201ENST00000237186 USP39Q53GS9 565 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms