RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 ARPC2O15144 300 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 MSCO60682 206 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 RASGRP1O95267 797 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 ASLP04424 464 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 NFKB2Q00653 900 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 MC1RQ01726 317 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 TIGD6Q17RP2 521 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 RPS27LQ71UM5 84 aaKnown RBP13.16□□□□□ -0.3
NEK4-201ENST00000233027 NIPA2Q8N8Q9 360 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 ARL14EPQ8N8R7 260 aaPredicted RBP13.16□□□□□ -0.3
NEK4-201ENST00000233027 PKP2Q99959 881 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 GPATCH1Q9BRR8 931 aaKnown RBP13.16□□□□□ -0.3
NEK4-201ENST00000233027 GNB5O14775 395 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 ERN1O75460 977 aaKnown RBP13.16□□□□□ -0.3
NEK4-201ENST00000233027 CD36P16671 472 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 MSS51Q4VC12 460 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 PIM3Q86V86 326 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 GLIS1Q8NBF1 620 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 PCDHGB3Q9Y5G1 929 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 H3BSA7 217 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 RNASEH2AO75792 299 aaKnown RBP13.16□□□□□ -0.3
NEK4-201ENST00000233027 ZNF432O94892 652 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 PPP1R8Q12972 351 aaKnown RBP13.16□□□□□ -0.3
NEK4-201ENST00000233027 PTGES3Q15185 160 aaKnown RBP13.16□□□□□ -0.3
NEK4-201ENST00000233027 TNFAIP8L3Q5GJ75 292 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 ARMCX6Q7L4S7 300 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 PMM1Q92871 262 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 UFD1Q92890 307 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 LRRC58Q96CX6 371 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 MAGEH1Q9H213 219 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 MAN2B2Q9Y2E5 1009 aa13.16□□□□□ -0.3
NEK4-201ENST00000233027 A0A1B0GVM2 712 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 TLL1O43897 1013 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 FAM92BQ6ZTR7 304 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 LINGO2Q7L985 606 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 ATCAYQ86WG3 371 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 OR8H3Q8N146 312 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 ING5Q8WYH8 240 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 NUSAP1Q9BXS6 441 aaKnown RBP13.15□□□□□ -0.3
NEK4-201ENST00000233027 SLC7A4O43246 635 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 NIPSNAP2O75323 286 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 EPHX1P07099 455 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 PRPS2P11908 318 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 CDH1P12830 882 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 ALAS2P22557 587 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 PDHA2P29803 388 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 PTGER3P43115 390 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 DNASE1L1P49184 302 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 HMGCS1Q01581 520 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 BNIP3Q12983 259 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 MSANTD2Q6P1R3 559 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 PAQR3Q6TCH7 311 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 PRSS55Q6UWB4 352 aaPredicted RBP13.15□□□□□ -0.3
NEK4-201ENST00000233027 NKD1Q969G9 470 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 PPP1R14BQ96C90 147 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 SLC2A6Q9UGQ3 507 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 ZNF12P17014 697 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 IMPDH1P20839 514 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 GPD2P43304 727 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 SLC24A5Q71RS6 500 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 MID1O15344 667 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 FLT3LGP49771 235 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 PLA2G16P53816 162 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 SEC13P55735 322 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 DLG1Q12959 904 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 KIAA0930Q6ICG6 404 aaPredicted RBP13.15□□□□□ -0.3
NEK4-201ENST00000233027 SLC35B2Q8TB61 432 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 DUSP26Q9BV47 211 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 PHPT1Q9NRX4 125 aaPredicted RBP13.15□□□□□ -0.3
NEK4-201ENST00000233027 UCKL1Q9NWZ5 548 aa13.15□□□□□ -0.3
NEK4-201ENST00000233027 OGNP20774 298 aaKnown RBP13.14□□□□□ -0.31
NEK4-201ENST00000233027 S100A1P23297 94 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 CSTF1Q05048 431 aaKnown RBP13.14□□□□□ -0.31
NEK4-201ENST00000233027 SCARB2Q14108 478 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 SWI5Q1ZZU3 235 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 TNFAIP8L1Q8WVP5 186 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 PYCR2Q96C36 320 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 ASB9Q96DX5 294 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 SLC35G5Q96KT7 338 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 C8orf48Q96LL4 319 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 YIPF4Q9BSR8 244 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 MRPS33Q9Y291 106 aaKnown RBP13.14□□□□□ -0.31
NEK4-201ENST00000233027 FER1L4A9Z1Z3 1794 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 MRC1P22897 1456 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 SLC38A8A6NNN8 435 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 KERAO60938 352 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 ECI2O75521 394 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 ESR1P03372 595 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 IFI30P13284 250 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 UGT1A6P19224 532 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 UGT1A1P22309 533 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 UGT1A4P22310 534 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 PRKCHP24723 683 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 UGT1A3P35503 534 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 IGFALSP35858 605 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 OR2B6P58173 313 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 KCNJ11Q14654 390 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 NPTX1Q15818 432 aa13.14□□□□□ -0.31
NEK4-201ENST00000233027 VARS2Q5ST30 1063 aaKnown RBP13.14□□□□□ -0.31
NEK4-201ENST00000233027 FUT10Q6P4F1 479 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms