RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 CATSPERBQ9H7T0 1116 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 KAT8Q9H7Z6 458 aaKnown RBP13.84□□□□□ -0.19
SF1-201ENST00000227503 IKZF3Q9UKT9 509 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 SUPT3HB4E1H0 165 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 H0Y626 953 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 ARVCFO00192 962 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 TRIM16O95361 564 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 IFI30P13284 250 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 ACVR2AP27037 513 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 RPL9P32969 192 aaKnown RBP13.84□□□□□ -0.19
SF1-201ENST00000227503 HTR7P34969 479 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 P2RX3P56373 397 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 MAXP61244 160 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 GBX1Q14549 363 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 SLC14A2Q15849 920 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 CYP4Z1Q86W10 505 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 PROSER1Q86XN7 944 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 ELMOD2Q8IZ81 293 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 NATD1Q8N6N6 113 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 NCLNQ969V3 563 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 L3HYPDHQ96EM0 354 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 FYTTD1Q96QD9 318 aaKnown RBP13.84□□□□□ -0.19
SF1-201ENST00000227503 TMEM209Q96SK2 561 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 ACOT13Q9NPJ3 140 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 COQ3Q9NZJ6 369 aa13.84□□□□□ -0.19
SF1-201ENST00000227503 NYNRINQ9P2P1 1898 aaKnown RBP13.84□□□□□ -0.19
SF1-201ENST00000227503 FAM20BO75063 409 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 MTHFD2P13995 350 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 WNT3AP56704 352 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 SLC35A2P78381 396 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 MRPS6P82932 125 aaKnown RBP13.83□□□□□ -0.2
SF1-201ENST00000227503 CDK10Q15131 360 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 GPR162Q16538 588 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 ATP6AP1LQ52LC2 224 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 C9orf131Q5VYM1 1079 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 NRARPQ7Z6K4 114 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 LACC1Q8IV20 430 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 PROKR1Q8TCW9 393 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 PTPN18Q99952 460 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 THUMPD3Q9BV44 507 aaKnown RBP13.83□□□□□ -0.2
SF1-201ENST00000227503 ATP13A1Q9HD20 1204 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 AIG1Q9NVV5 245 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 COMMD8Q9NX08 183 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 VAPAQ9P0L0 249 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 SNX8Q9Y5X2 465 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 A0A0X1KG70 313 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 METTL15A6NJ78 407 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 CENPXA8MT69 81 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 CENPBD1B2RD01 187 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 DSCR3O14972 297 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 ZW10O43264 779 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 PEX11BO96011 259 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 ODC1P11926 461 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 HTR3AP46098 478 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 CHRNEQ04844 493 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 FOXM1Q08050 763 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 IRF5Q13568 498 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 ZNF181Q2M3W8 571 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 GTDC1Q4AE62 458 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 PAN2Q504Q3 1202 aaKnown RBP13.83□□□□□ -0.2
SF1-201ENST00000227503 MORN1Q5T089 497 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 TIGD7Q6NT04 549 aaPredicted RBP13.83□□□□□ -0.2
SF1-201ENST00000227503 CD300LGQ6UXG3 332 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 DLEU7Q6UYE1 221 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 GALNT10Q86SR1 603 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 BPHLQ86WA6 291 aaPredicted RBP13.83□□□□□ -0.2
SF1-201ENST00000227503 HID1Q8IV36 788 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 IQCF2Q8IXL9 164 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 TCAIMQ8N3R3 496 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 OR10T2Q8NGX3 314 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 RBM4BQ9BQ04 359 aaKnown RBP13.83□□□□□ -0.2
SF1-201ENST00000227503 RBM4Q9BWF3 364 aaKnown RBP13.83□□□□□ -0.2
SF1-201ENST00000227503 ZNF408Q9H9D4 720 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 ARNT2Q9HBZ2 717 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 RGS18Q9NS28 235 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 MPP6Q9NZW5 540 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 DNAJB9Q9UBS3 223 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 MAGEL2Q9UJ55 1249 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 ASB1Q9Y576 335 aa13.83□□□□□ -0.2
SF1-201ENST00000227503 A0A096LPI6 279 aa13.82□□□□□ -0.2
SF1-201ENST00000227503 A0A0G2JMP0 313 aa13.82□□□□□ -0.2
SF1-201ENST00000227503 KRT87PA6NCN2 255 aa13.82□□□□□ -0.2
SF1-201ENST00000227503 AIREO43918 545 aa13.82□□□□□ -0.2
SF1-201ENST00000227503 CYP11A1P05108 521 aa13.82□□□□□ -0.2
SF1-201ENST00000227503 AZGP1P25311 298 aaKnown RBP13.82□□□□□ -0.2
SF1-201ENST00000227503 C21orf33P30042 268 aaPredicted RBP13.82□□□□□ -0.2
SF1-201ENST00000227503 CCR1P32246 355 aa13.82□□□□□ -0.2
SF1-201ENST00000227503 BRCC3P46736 316 aa13.82□□□□□ -0.2
SF1-201ENST00000227503 GNG2P59768 71 aa13.82□□□□□ -0.2
SF1-201ENST00000227503 CYP4F2P78329 520 aa13.82□□□□□ -0.2
SF1-201ENST00000227503 CYP4F3Q08477 520 aa13.82□□□□□ -0.2
SF1-201ENST00000227503 GALNT1Q10472 559 aaPredicted RBP13.82□□□□□ -0.2
SF1-201ENST00000227503 SLAMF1Q13291 335 aa13.82□□□□□ -0.2
SF1-201ENST00000227503 IRF3Q14653 427 aa13.82□□□□□ -0.2
SF1-201ENST00000227503 SYT6Q5T7P8 510 aaPredicted RBP13.82□□□□□ -0.2
SF1-201ENST00000227503 RGMBQ6NW40 437 aa13.82□□□□□ -0.2
SF1-201ENST00000227503 RTL3Q8N8U3 475 aaKnown RBP13.82□□□□□ -0.2
SF1-201ENST00000227503 PJA1Q8NG27 643 aa13.82□□□□□ -0.2
SF1-201ENST00000227503 FAM162AQ96A26 154 aa13.82□□□□□ -0.2
SF1-201ENST00000227503 ISG20Q96AZ6 181 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms