RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 CERS6Q6ZMG9 384 aa17.58■□□□□ 0.4
PFN1-201ENST00000225655 SDCCAG8Q86SQ7 713 aaPredicted RBP17.58■□□□□ 0.4
PFN1-201ENST00000225655 CCDC25Q86WR0 208 aa17.58■□□□□ 0.4
PFN1-201ENST00000225655 ZBED8Q8IZ13 594 aa17.58■□□□□ 0.4
PFN1-201ENST00000225655 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.58■□□□□ 0.4
PFN1-201ENST00000225655 OR4L1Q8NH43 312 aa17.58■□□□□ 0.4
PFN1-201ENST00000225655 SGSM3Q96HU1 749 aa17.58■□□□□ 0.4
PFN1-201ENST00000225655 SIGLEC10Q96LC7 697 aa17.58■□□□□ 0.4
PFN1-201ENST00000225655 CATSPER2Q96P56 530 aa17.58■□□□□ 0.4
PFN1-201ENST00000225655 ADNPQ9H2P0 1102 aa17.58■□□□□ 0.4
PFN1-201ENST00000225655 CATSPERZQ9NTU4 200 aa17.58■□□□□ 0.4
PFN1-201ENST00000225655 SLC2A6Q9UGQ3 507 aa17.58■□□□□ 0.4
PFN1-201ENST00000225655 HEMK1Q9Y5R4 338 aaPredicted RBP17.58■□□□□ 0.4
PFN1-201ENST00000225655 TENM4Q6N022 2769 aa17.58■□□□□ 0.4
PFN1-201ENST00000225655 LOC101059948A0A1B0GTJ6 334 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 CCDC162PA2VCL2 907 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 KLHL33A6NCF5 533 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 VAPBO95292 243 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 GOT2P00505 430 aaKnown RBP17.57■□□□□ 0.4
PFN1-201ENST00000225655 ELK3P41970 407 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 SEPHS1P49903 392 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 XIAPP98170 497 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 RPE65Q16518 533 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 LONRF1Q17RB8 773 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 METRNLQ641Q3 311 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 TMEM220Q6QAJ8 160 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 FAM83HQ6ZRV2 1179 aaPredicted RBP17.57■□□□□ 0.4
PFN1-201ENST00000225655 PRICKLE2Q7Z3G6 844 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 TMEM135Q86UB9 458 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 ESX1Q8N693 406 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 CALML6Q8TD86 181 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 PYROXD1Q8WU10 500 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 KLHL6Q8WZ60 621 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 UBXN4Q92575 508 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 MFSD3Q96ES6 412 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 FMO2Q99518 471 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 COPS8Q99627 209 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 ULBP3Q9BZM4 244 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 SAYSD1Q9NPB0 183 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 CHMP2BQ9UQN3 213 aa17.57■□□□□ 0.4
PFN1-201ENST00000225655 E7ESA3 106 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 TP73O15350 636 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 KIF1CO43896 1103 aaKnown RBP17.56■□□□□ 0.4
PFN1-201ENST00000225655 STAT5AP42229 794 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 SH3BP2P78314 561 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 NFE2L1Q14494 772 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 MSS51Q4VC12 460 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 CACHD1Q5VU97 1274 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 IRGCQ6NXR0 463 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 CES3Q6UWW8 571 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 ZDHHC24Q6UX98 284 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 FAM92BQ6ZTR7 304 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 PALM2Q8IXS6 379 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 LMNTD2Q8IXW0 634 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 UNC5BQ8IZJ1 945 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 NXPE1Q8N323 547 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 FBXO36Q8NEA4 188 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 GPR150Q8NGU9 434 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 CFAP36Q96G28 342 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 ZNF778Q96MU6 729 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 OR6C1Q96RD1 312 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 FAM167BQ9BTA0 163 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 SLC25A18Q9H1K4 315 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 C20orf96Q9NUD7 363 aaPredicted RBP17.56■□□□□ 0.4
PFN1-201ENST00000225655 SEMA5BQ9P283 1151 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 PSMD13Q9UNM6 376 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 VPS9D1Q9Y2B5 631 aa17.56■□□□□ 0.4
PFN1-201ENST00000225655 SETXQ7Z333 2677 aaKnown RBP17.56■□□□□ 0.4
PFN1-201ENST00000225655 AGAP14A8MT82 685 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 CD3EAPO15446 510 aaKnown RBP17.55■□□□□ 0.4
PFN1-201ENST00000225655 NKX2-8O15522 239 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 MTHFD1P11586 935 aaKnown RBP17.55■□□□□ 0.4
PFN1-201ENST00000225655 ZNF28P17035 718 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 MCM3P25205 808 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 ACRV1P26436 265 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 PBLDP30039 288 aaPredicted RBP17.55■□□□□ 0.4
PFN1-201ENST00000225655 CCR10P46092 362 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 TTPAP49638 278 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 CDC20Q12834 499 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 CBLBQ13191 982 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 CRYMQ14894 314 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 CRTC2Q53ET0 693 aaPredicted RBP17.55■□□□□ 0.4
PFN1-201ENST00000225655 HP1BP3Q5SSJ5 553 aaPredicted RBP17.55■□□□□ 0.4
PFN1-201ENST00000225655 RNF187Q5TA31 235 aaPredicted RBP17.55■□□□□ 0.4
PFN1-201ENST00000225655 CYB5D1Q6P9G0 228 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 KLHL35Q6PF15 583 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 ANKMY2Q8IV38 441 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 EIF1ADQ8N9N8 165 aaKnown RBP17.55■□□□□ 0.4
PFN1-201ENST00000225655 OR2L2Q8NH16 312 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 PWWP2AQ96N64 755 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 FAM96AQ9H5X1 160 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 ZDHHC18Q9NUE0 388 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 ZDHHC3Q9NYG2 299 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 IL17BQ9UHF5 180 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 TUBD1Q9UJT1 453 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 ACSL5Q9ULC5 683 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 TEX264Q9Y6I9 313 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 FAM169AQ9Y6X4 670 aa17.55■□□□□ 0.4
PFN1-201ENST00000225655 BOD1L1Q8NFC6 3051 aa17.54■□□□□ 0.4
PFN1-201ENST00000225655 MGAT4DA6NG13 374 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms