RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Gm3411Q8C7R2 150 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Nipal2Q91WC7 383 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 NlnQ91YP2 704 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Dio3Q91ZI8 304 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Katnal2Q9D3R6 539 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Olfr706Q9EPF8 316 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Cst9Q9Z0H6 137 aa15.58■□□□□ 0.08
Trim39-203ENSMUST00000113706 Chd3B1AR17 2055 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Zfp811A0A0J9YU71 552 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 4921501E09RikA0A0R4J054 908 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Tex16F6WNY1 1150 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Scamp3O35609 349 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Cbx4O55187 551 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Mkl2P59759 1080 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Stx1bP61264 288 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Rbm15Q0VBL3 962 aaKnown RBP15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Slc22a23Q3UHH2 689 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Tab3Q571K4 716 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Cyp1b1Q64429 543 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Dalrd3Q6PJN8 538 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Svs1Q6WIZ7 820 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Dna2Q6ZQJ5 1062 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 PdprQ7TSQ8 878 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Tmem121Q80XA0 318 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Gxylt2Q810K9 444 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Vps26bQ8C0E2 336 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Gpat3Q8C0N2 438 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Pi4k2bQ8CBQ5 469 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Kdelr3Q8R1L4 214 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 BsndQ8VIM4 307 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Ptbp2Q91Z31 531 aaKnown RBP15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Catsper1Q91ZR5 686 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Smarcd2Q99JR8 531 aaKnown RBP15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Med21Q9CQ39 144 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Ndufa13Q9ERS2 144 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Gm4969D3YZT1 566 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Adh6aE9Q5Z6 375 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Srp72F8VQC1 671 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Slc2a3P32037 493 aaKnown RBP15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 PrtgQ2EY15 1191 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 MyrfQ3UR85 1138 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Armcx5Q3UZB0 606 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Gm5800Q497L3 186 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Utp14bQ6EJB6 756 aaKnown RBP15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Ces2bQ6PDB7 556 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 B130006D01RikQ8BRH6 153 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Rdh13Q8CEE7 334 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Kctd5Q8VC57 234 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Tex19.1Q99MV2 351 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Ankrd7Q9D504 279 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Rgs20Q9QZB1 239 aa15.57■□□□□ 0.08
Trim39-203ENSMUST00000113706 Fam71f2B2RXB0 297 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Maml3D4QGC2 1135 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Zfp871G5E905 615 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Lingo4Q149C3 593 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 DtlQ3TLR7 729 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Tex24Q5DP50 351 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Fam83eQ80XS7 481 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Trpv3Q8K424 791 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Rbm47Q91WT8 590 aaKnown RBP15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 TMEM121BQ99MX7 572 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Trim12aQ99PQ1 284 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Borcs5Q9D920 195 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Pla2g2fQ9QZT4 168 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Gipc1Q9Z0G0 333 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Bscl2Q9Z2E9 383 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 TrioQ0KL02 3102 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Tmem236A2ARJ3 344 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 2210016F16RikG3X8U3 338 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Gm3488M0QW81 238 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Alox8O35936 677 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Serpina3kP07759 418 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 TgfbiP82198 683 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Zfp868Q3UTQ6 422 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Rnf145Q5SWK7 663 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Khdrbs1Q60749 443 aaKnown RBP15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Tnpo3Q6P2B1 923 aaKnown RBP15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Cxcr1Q810W6 351 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 CptpQ8BS40 216 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Slc43a1Q8BSM7 564 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Ccdc151Q8BSN3 593 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Tmem168Q91VX9 697 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Pinx1Q9CZX5 332 aaKnown RBP15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Dnaaf1Q9D2H9 634 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Mrpl17Q9D8P4 176 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Fbxl12Q9EPX5 326 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 ScelQ9EQG3 652 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Dnaja2Q9QYJ0 412 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Nipsnap3aB1AWZ3 247 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Vmn1r55E9Q8I6 310 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Hk1P17710 974 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Hsd11b2P51661 386 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Il1rapQ61730 570 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 XpaQ64267 272 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 N4bp1Q6A037 893 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 FicdQ8BIX9 458 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Slc44a2Q8BY89 706 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Mtif2Q91YJ5 727 aaKnown RBP15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Ak5Q920P5 562 aa15.56■□□□□ 0.08
Trim39-203ENSMUST00000113706 Ndufaf4Q9D1H6 173 aa15.56■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 68.4 ms