RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 ERLEC1Q96DZ1 483 aa16.1■□□□□ 0.17
PHGDH-216ENST00000641375 FBRSQ9HAH7 460 aa16.1■□□□□ 0.17
PHGDH-216ENST00000641375 TRIM39Q9HCM9 518 aa16.1■□□□□ 0.17
PHGDH-216ENST00000641375 BAIAP2L1Q9UHR4 511 aa16.1■□□□□ 0.17
PHGDH-216ENST00000641375 TIMM22Q9Y584 194 aa16.1■□□□□ 0.17
PHGDH-216ENST00000641375 TNRC18O15417 2968 aaPredicted RBP16.1■□□□□ 0.17
PHGDH-216ENST00000641375 UNC80Q8N2C7 3258 aa16.1■□□□□ 0.17
PHGDH-216ENST00000641375 A8MUI8 341 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 MEI4A8MW99 385 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 K7ESM1 405 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 OR7A17O14581 309 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 KATNA1O75449 491 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 WFS1O76024 890 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 MATN4O95460 622 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 LINC00032P0C843 101 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 EPB42P16452 691 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 GCKP35557 465 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 RAP1GDS1P52306 607 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 ERVPABLB-1P60509 514 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 STX1BP61266 288 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 CUL3Q13618 768 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 GTF2H3Q13889 308 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 WASHC2DQ5SRD0 308 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-216ENST00000641375 CDYL2Q8N8U2 506 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 OR2T3Q8NH03 318 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 TUBGCP3Q96CW5 907 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 FAM210AQ96ND0 272 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 PRO3102Q9H379 93 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 TRPM6Q9BX84 2022 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 GSTM1P09488 218 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 LBPP18428 481 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 IGFBP4P22692 258 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 SLC25A3Q00325 362 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 GSTM4Q03013 218 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 LETMD1Q6P1Q0 360 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 MILR1Q7Z6M3 343 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 RALGPS2Q86X27 583 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-216ENST00000641375 SCUBE1Q8IWY4 988 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 HDDC3Q8N4P3 179 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 OR4F6Q8NGB9 312 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 METTL6Q8TCB7 284 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 EZH1Q92800 747 aaPredicted RBP16.09■□□□□ 0.17
PHGDH-216ENST00000641375 GABRG3Q99928 467 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 THTPAQ9BU02 230 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 SLC32A1Q9H598 525 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 RIC8BQ9NVN3 520 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 POLG2Q9UHN1 485 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 GPR34Q9UPC5 381 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 BTRCQ9Y297 605 aa16.09■□□□□ 0.17
PHGDH-216ENST00000641375 SLC5A10A0PJK1 596 aa16.08■□□□□ 0.16
PHGDH-216ENST00000641375 PSMD12O00232 456 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-216ENST00000641375 VEGFDO43915 354 aa16.08■□□□□ 0.16
PHGDH-216ENST00000641375 PCDH8O95206 1070 aa16.08■□□□□ 0.16
PHGDH-216ENST00000641375 MAP4P27816 1152 aaKnown RBP16.08■□□□□ 0.16
PHGDH-216ENST00000641375 TRAF3Q13114 568 aa16.08■□□□□ 0.16
PHGDH-216ENST00000641375 FASTKQ14296 549 aaKnown RBP16.08■□□□□ 0.16
PHGDH-216ENST00000641375 XKR7Q5GH72 579 aa16.08■□□□□ 0.16
PHGDH-216ENST00000641375 OGFOD2Q6N063 350 aa16.08■□□□□ 0.16
PHGDH-216ENST00000641375 ADGRG6Q86SQ4 1221 aa16.08■□□□□ 0.16
PHGDH-216ENST00000641375 HIC2Q96JB3 615 aa16.08■□□□□ 0.16
PHGDH-216ENST00000641375 CDK15Q96Q40 435 aa16.08■□□□□ 0.16
PHGDH-216ENST00000641375 NTMT1Q9BV86 223 aa16.08■□□□□ 0.16
PHGDH-216ENST00000641375 OR2AG1Q9H205 316 aa16.08■□□□□ 0.16
PHGDH-216ENST00000641375 TTYH1Q9H313 450 aaPredicted RBP16.08■□□□□ 0.16
PHGDH-216ENST00000641375 NDE1Q9NXR1 346 aa16.08■□□□□ 0.16
PHGDH-216ENST00000641375 PTGDR2Q9Y5Y4 395 aa16.08■□□□□ 0.16
PHGDH-216ENST00000641375 ST14Q9Y5Y6 855 aa16.08■□□□□ 0.16
PHGDH-216ENST00000641375 TMEM202A6NGA9 273 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 LIN7AO14910 233 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-216ENST00000641375 CAPN1P07384 714 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 HGFP14210 728 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 GDF5P43026 501 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 ACADVLP49748 655 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 CCR3P51677 355 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 TAS2R38P59533 333 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 ADGRE1Q14246 886 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 AGERQ15109 404 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 RBBP5Q15291 538 aaKnown RBP16.07■□□□□ 0.16
PHGDH-216ENST00000641375 LRIT3Q3SXY7 679 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 C2orf27AQ580R0 203 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 ADAMTSL4Q6UY14 1074 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 MBOAT1Q6ZNC8 495 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 LRRC70Q7Z2Q7 622 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 TRMT11Q7Z4G4 463 aaKnown RBP16.07■□□□□ 0.16
PHGDH-216ENST00000641375 CACUL1Q86Y37 369 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 TRAPPC5Q8IUR0 188 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 RASGRP3Q8IV61 690 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 SLC22A15Q8IZD6 547 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 FAM161BQ96MY7 647 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 FOPNLQ96NB1 174 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 C8orf33Q9H7E9 229 aaPredicted RBP16.07■□□□□ 0.16
PHGDH-216ENST00000641375 EFCAB1Q9HAE3 211 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 ATG2BQ96BY7 2078 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 SPTBN5Q9NRC6 3674 aaKnown RBP16.07■□□□□ 0.16
PHGDH-216ENST00000641375 ZFC3H1O60293 1989 aaKnown RBP16.07■□□□□ 0.16
PHGDH-216ENST00000641375 C17orf113A0A1B0GUU1 675 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 PSIP1O75475 530 aaKnown RBP16.07■□□□□ 0.16
PHGDH-216ENST00000641375 EBLN1P0CF75 366 aa16.07■□□□□ 0.16
PHGDH-216ENST00000641375 HMOX2P30519 316 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms