RNA–Protein interactions for RNA: ENST00000640717.1

SPIN3-243, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,001 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-243ENST00000640717 SHHQ15465 462 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 MAPRE2Q15555 327 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 GTDC1Q4AE62 458 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 PRSS36Q5K4E3 855 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 SLC15A3Q8IY34 581 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 PHC3Q8NDX5 983 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 TUBGCP5Q96RT8 1024 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 MTERF1Q99551 399 aaKnown RBP12.48□□□□□ -0.41
SPIN3-243ENST00000640717 YBX2Q9Y2T7 364 aaKnown RBP12.48□□□□□ -0.41
SPIN3-243ENST00000640717 PABPN1LA6NDY0 278 aaKnown RBP12.48□□□□□ -0.41
SPIN3-243ENST00000640717 PDLIM1O00151 329 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 LINC01565O15544 149 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 OR56A5P0C7T3 313 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 EPB42P16452 691 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 POLR2JP52435 117 aaKnown RBP12.48□□□□□ -0.41
SPIN3-243ENST00000640717 PPP1R8Q12972 351 aaKnown RBP12.48□□□□□ -0.41
SPIN3-243ENST00000640717 RNF220Q5VTB9 566 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 FBXL19Q6PCT2 694 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 PSRC1Q6PGN9 363 aaPredicted RBP12.48□□□□□ -0.41
SPIN3-243ENST00000640717 TXNDC11Q6PKC3 985 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 TRAPPC5Q8IUR0 188 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 AHI1Q8N157 1196 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 PCYOX1LQ8NBM8 494 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 VN1R2Q8NFZ6 395 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 PROKR1Q8TCW9 393 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 LRRC58Q96CX6 371 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 EGLN2Q96KS0 407 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 RPP25Q9BUL9 199 aaKnown RBP12.48□□□□□ -0.41
SPIN3-243ENST00000640717 CD244Q9BZW8 370 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 SDR39U1Q9NRG7 319 aaPredicted RBP12.48□□□□□ -0.41
SPIN3-243ENST00000640717 TMEM98Q9Y2Y6 226 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 IRAK3Q9Y616 596 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 CROCCQ5TZA2 2017 aa12.48□□□□□ -0.41
SPIN3-243ENST00000640717 FXYD1O00168 92 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 ULK1O75385 1050 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 HIST1H2AGP0C0S8 130 aaPredicted RBP12.47□□□□□ -0.41
SPIN3-243ENST00000640717 PCNAP12004 261 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 IDO1P14902 403 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 ACADSP16219 412 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 HIST1H2ADP20671 130 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 OXTRP30559 389 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 TTLL9Q3SXZ7 439 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 SYTL3Q4VX76 610 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 CYP20A1Q6UW02 462 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 RGL4Q8IZJ4 473 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 EME1Q96AY2 570 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 HIST1H2AHQ96KK5 128 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 HIST1H2AJQ99878 128 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 KXD1Q9BQD3 176 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 H2AFJQ9BTM1 129 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 PBX4Q9BYU1 374 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 PKD2L2Q9NZM6 624 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 PTBP2Q9UKA9 531 aaKnown RBP12.47□□□□□ -0.41
SPIN3-243ENST00000640717 LRCH1Q9Y2L9 728 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 HEPACAM2A8MVW5 462 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 OBSL1O75147 1896 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 BCAS2O75934 225 aaPredicted RBP12.47□□□□□ -0.41
SPIN3-243ENST00000640717 OTCP00480 354 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 SLC6A2P23975 617 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 RPL10P27635 214 aaKnown RBP12.47□□□□□ -0.41
SPIN3-243ENST00000640717 PEX19P40855 299 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 SEC13P55735 322 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 POLR2LP62875 67 aaKnown RBP12.47□□□□□ -0.41
SPIN3-243ENST00000640717 HERC3Q15034 1050 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 FAM174BQ3ZCQ3 159 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 TANGO2Q6ICL3 276 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 NEK5Q6P3R8 708 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 TMEM220Q6QAJ8 160 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 DHFR2Q86XF0 187 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 NPAS3Q8IXF0 933 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 RASGEF1AQ8N9B8 481 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 PIP4K2CQ8TBX8 421 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 JADE3Q92613 823 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 ASB2Q96Q27 587 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 ZNF382Q96SR6 550 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 ACAT2Q9BWD1 397 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 KIAA1671Q9BY89 1806 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 OR2AG1Q9H205 316 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 TBC1D14Q9P2M4 693 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 EPS15L1Q9UBC2 864 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 PSMD13Q9UNM6 376 aa12.47□□□□□ -0.41
SPIN3-243ENST00000640717 TRBV5-4A0A0C4DH59 114 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 EPOPA6NHQ4 379 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 LATO43561 262 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 KLK8O60259 260 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 GBAP04062 536 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 ANXA5P08758 320 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 RPL26P61254 145 aaKnown RBP12.46□□□□□ -0.41
SPIN3-243ENST00000640717 ZNF284Q2VY69 593 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 GPR33Q49SQ1 333 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 RAET1GQ6H3X3 334 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 ANKRD26P1Q6NSI1 321 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 IYDQ6PHW0 289 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 BLOC1S3Q6QNY0 202 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 MACC1Q6ZN28 852 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 KIAA2013Q8IYS2 634 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 LIX1Q8N485 282 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 SELENOMQ8WWX9 145 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 YIPF3Q9GZM5 350 aa12.46□□□□□ -0.41
SPIN3-243ENST00000640717 CXorf56Q9H5V9 222 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms