RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 FERD3LQ96RJ6 166 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 SLC38A3Q99624 504 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 NRTNQ99748 197 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 TBC1D10AQ9BXI6 508 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 SYNDIG1Q9H7V2 258 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 CAB39LQ9H9S4 337 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 TAS2R13Q9NYV9 303 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 TRMT6Q9UJA5 497 aaKnown RBP12.88□□□□□ -0.35
GTF3A-209ENST00000640289 SLC39A10Q9ULF5 831 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 APOBEC2Q9Y235 224 aaKnown RBP12.88□□□□□ -0.35
GTF3A-209ENST00000640289 VWA7Q9Y334 891 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 PCDHGA1Q9Y5H4 931 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 NFS1Q9Y697 457 aa12.88□□□□□ -0.35
GTF3A-209ENST00000640289 ARID1BQ8NFD5 2236 aaPredicted RBP12.88□□□□□ -0.35
GTF3A-209ENST00000640289 POC1B-GALNT4F8VUJ3 575 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 RPLP0P05388 317 aaKnown RBP12.87□□□□□ -0.35
GTF3A-209ENST00000640289 ABHD2P08910 425 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 PNLIPP16233 465 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 SPRP35270 261 aaPredicted RBP12.87□□□□□ -0.35
GTF3A-209ENST00000640289 LIMK2P53671 638 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 TAS2R39P59534 338 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 PRKG2Q13237 762 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 PDAP1Q13442 181 aaKnown RBP12.87□□□□□ -0.35
GTF3A-209ENST00000640289 BMPR2Q13873 1038 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 KRT33BQ14525 404 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 KLHL38Q2WGJ6 581 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 AMZ1Q400G9 498 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 NKAIN2Q5VXU1 208 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 UGT3A1Q6NUS8 523 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 PAQR3Q6TCH7 311 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 CEP97Q8IW35 865 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 AVL9Q8NBF6 648 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 AENQ8WTP8 325 aaKnown RBP12.87□□□□□ -0.35
GTF3A-209ENST00000640289 UBLCP1Q8WVY7 318 aaPredicted RBP12.87□□□□□ -0.35
GTF3A-209ENST00000640289 PAFAH2Q99487 392 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 GPR22Q99680 433 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 HGH1Q9BTY7 390 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 KCNK4Q9NYG8 393 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 RAB21Q9UL25 225 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 ASF1AQ9Y294 204 aa12.87□□□□□ -0.35
GTF3A-209ENST00000640289 IGHV1OR21-1A0A087WYE8 117 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 LILRA5A6NI73 299 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 OPA1O60313 960 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 ITGA2BP08514 1039 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 CD9P21926 228 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 MAPK9P45984 424 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 BDKRB1P46663 353 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 INSM1Q01101 510 aaPredicted RBP12.86□□□□□ -0.35
GTF3A-209ENST00000640289 ILKQ13418 452 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 TTLL9Q3SXZ7 439 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 N4BP2L1Q5TBK1 243 aaPredicted RBP12.86□□□□□ -0.35
GTF3A-209ENST00000640289 TMEM207Q6UWW9 146 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 CYHR1Q6ZMK1 362 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 DGLUCYQ7Z3D6 616 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 PIWIL4Q7Z3Z4 852 aaKnown RBP12.86□□□□□ -0.35
GTF3A-209ENST00000640289 RBM12BQ8IXT5 1001 aaKnown RBP12.86□□□□□ -0.35
GTF3A-209ENST00000640289 EEF1AKMT1Q8WVE0 214 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 SLC44A1Q8WWI5 657 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 SH3KBP1Q96B97 665 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.86□□□□□ -0.35
GTF3A-209ENST00000640289 ABCG4Q9H172 646 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 LRRN3Q9H3W5 708 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 KIR3DX1Q9H7L2 352 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 KLHL42Q9P2K6 505 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 CIDEBQ9UHD4 219 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 SLC24A2Q9UI40 661 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 ATXN7L1Q9ULK2 861 aaPredicted RBP12.86□□□□□ -0.35
GTF3A-209ENST00000640289 HEBP2Q9Y5Z4 205 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 COLEC10Q9Y6Z7 277 aa12.86□□□□□ -0.35
GTF3A-209ENST00000640289 PIEZO1Q92508 2521 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 EXOC1LA0A1B0GW35 172 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 HMX2A2RU54 273 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 KRT87PA6NCN2 255 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 NTN3O00634 580 aaPredicted RBP12.85□□□□□ -0.35
GTF3A-209ENST00000640289 PHGDHO43175 533 aaKnown RBP12.85□□□□□ -0.35
GTF3A-209ENST00000640289 TSPAN12O95859 305 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 TPBGLP0DKB5 382 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 NDUFS1P28331 727 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 GCAP28676 217 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 CD1CP29017 333 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 ATP5DP30049 168 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 GMPRP36959 345 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 SKIV2L2P42285 1042 aaKnown RBP12.85□□□□□ -0.35
GTF3A-209ENST00000640289 MSH2P43246 934 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 GPR3P46089 330 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 PPM1FP49593 454 aaPredicted RBP12.85□□□□□ -0.35
GTF3A-209ENST00000640289 E2F1Q01094 437 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 POU4F1Q01851 419 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 CFHR1Q03591 330 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 USP10Q14694 798 aaKnown RBP12.85□□□□□ -0.35
GTF3A-209ENST00000640289 PLCL1Q15111 1095 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 CCSMST1Q4G0I0 132 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 EMBQ6PCB8 327 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 UNC5DQ6UXZ4 953 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 USP53Q70EK8 1073 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 TMPRSS9Q7Z410 1059 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 CMC1Q7Z7K0 106 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 TBC1D21Q8IYX1 336 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 OR52E1Q8NGJ3 308 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 OR5K2Q8NHB8 316 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms