RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 SH3BP2P78314 561 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 OTUD4Q01804 1114 aaKnown RBP13.46□□□□□ -0.25
HLA-C-210ENST00000640219 PTSQ03393 145 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 RAET1GQ6H3X3 334 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 USP45Q70EL2 814 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 TRMT10CQ7L0Y3 403 aaKnown RBP13.46□□□□□ -0.25
HLA-C-210ENST00000640219 VSIG1Q86XK7 387 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 RCOR2Q8IZ40 523 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 CISD2Q8N5K1 135 aaKnown RBP13.46□□□□□ -0.25
HLA-C-210ENST00000640219 TFB1MQ8WVM0 346 aaKnown RBP13.46□□□□□ -0.25
HLA-C-210ENST00000640219 FATE1Q969F0 183 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 EID2BQ96D98 161 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 IMP4Q96G21 291 aaKnown RBP13.46□□□□□ -0.25
HLA-C-210ENST00000640219 SCARF2Q96GP6 870 aaPredicted RBP13.46□□□□□ -0.25
HLA-C-210ENST00000640219 RBM41Q96IZ5 413 aaKnown RBP13.46□□□□□ -0.25
HLA-C-210ENST00000640219 C9orf72Q96LT7 481 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 QKIQ96PU8 341 aaKnown RBP eCLIP13.46□□□□□ -0.25
HLA-C-210ENST00000640219 CCT8L2Q96SF2 557 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 TXLNGYQ9BZA5 131 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 ROPN1BQ9BZX4 212 aaPredicted RBP13.46□□□□□ -0.25
HLA-C-210ENST00000640219 EPB41L1Q9H4G0 881 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 ROPN1Q9HAT0 212 aaPredicted RBP13.46□□□□□ -0.25
HLA-C-210ENST00000640219 GLOD4Q9HC38 313 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 ZDHHC18Q9NUE0 388 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 KCTD5Q9NXV2 234 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 WHRNQ9P202 907 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 SHOC2Q9UQ13 582 aa13.46□□□□□ -0.25
HLA-C-210ENST00000640219 CSMD2Q7Z408 3487 aa13.46□□□□□ -0.26
HLA-C-210ENST00000640219 CROCCQ5TZA2 2017 aa13.46□□□□□ -0.26
HLA-C-210ENST00000640219 MN1Q10571 1320 aaPredicted RBP13.45□□□□□ -0.26
HLA-C-210ENST00000640219 TCRBV7S2A1N4TA0A589 114 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 H7C0C1 242 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 NDC80O14777 642 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 CEACAM4O75871 244 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 AGTP01019 485 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 PTPN4P29074 926 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 CHRNA4P43681 627 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 ATP5OP48047 213 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 SEPHS1P49903 392 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 GFERP55789 205 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 MAGOHP61326 146 aaKnown RBP13.45□□□□□ -0.26
HLA-C-210ENST00000640219 CDK18Q07002 472 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 TFDP2Q14188 446 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 PYCR3Q53H96 274 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 TEX44Q53QW1 395 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 RALGPS1Q5JS13 557 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 BBS12Q6ZW61 710 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 MARK2Q7KZI7 788 aaKnown RBP13.45□□□□□ -0.26
HLA-C-210ENST00000640219 TAOK1Q7L7X3 1001 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 TECPR1Q7Z6L1 1165 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 SYVN1Q86TM6 617 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 ZNF567Q8N184 647 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 CBARPQ8N350 705 aaPredicted RBP13.45□□□□□ -0.26
HLA-C-210ENST00000640219 FDCSPQ8NFU4 85 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 OR2W6PQ8NHA6 318 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 ACTL9Q8TC94 416 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 SPOCK2Q92563 424 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 P3H4Q92791 437 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 PGM2Q96G03 612 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 POM121Q96HA1 1249 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 OXNAD1Q96HP4 312 aaPredicted RBP13.45□□□□□ -0.26
HLA-C-210ENST00000640219 TRIB3Q96RU7 358 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 GORASP1Q9BQQ3 440 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 TMEM109Q9BVC6 243 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 TBC1D10AQ9BXI6 508 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 GPR87Q9BY21 358 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.45□□□□□ -0.26
HLA-C-210ENST00000640219 OSBPL8Q9BZF1 889 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 ABCG8Q9H221 673 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 PPANQ9NQ55 473 aaKnown RBP13.45□□□□□ -0.26
HLA-C-210ENST00000640219 KLHL8Q9P2G9 620 aaPredicted RBP13.45□□□□□ -0.26
HLA-C-210ENST00000640219 TMEM98Q9Y2Y6 226 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 PPIL1Q9Y3C6 166 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 SPO11Q9Y5K1 396 aa13.45□□□□□ -0.26
HLA-C-210ENST00000640219 PCYT1BQ9Y5K3 369 aaPredicted RBP13.45□□□□□ -0.26
HLA-C-210ENST00000640219 C1orf232A0A0U1RR37 186 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 HEATR9A2RTY3 570 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 PRSS44E7EML9 344 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 AURKAO14965 403 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 C9P02748 559 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 FGF5P12034 268 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 STC1P52823 247 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 PER3P56645 1201 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 RPS15P62841 145 aaKnown RBP13.44□□□□□ -0.26
HLA-C-210ENST00000640219 IL10RAQ13651 578 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 LRP8Q14114 963 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 PLEKHN1Q494U1 663 aaPredicted RBP13.44□□□□□ -0.26
HLA-C-210ENST00000640219 ZNF648Q5T619 568 aaPredicted RBP13.44□□□□□ -0.26
HLA-C-210ENST00000640219 IYDQ6PHW0 289 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 YTHDF3Q7Z739 585 aaKnown RBP13.44□□□□□ -0.26
HLA-C-210ENST00000640219 SLC9B2Q86UD5 537 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 GALNT13Q8IUC8 556 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 SLC25A41Q8N5S1 370 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.44□□□□□ -0.26
HLA-C-210ENST00000640219 SLCO2A1Q92959 643 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 TEKT5Q96M29 485 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 RIOK2Q9BVS4 552 aaKnown RBP13.44□□□□□ -0.26
HLA-C-210ENST00000640219 NUDT9Q9BW91 350 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 SLC25A51Q9H1U9 297 aa13.44□□□□□ -0.26
HLA-C-210ENST00000640219 RABEP2Q9H5N1 569 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms