RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 NANOGQ9H9S0 305 aa21.08■□□□□ 0.97
CLN6-224ENST00000638076 PDE10AQ9Y233 779 aa21.08■□□□□ 0.97
CLN6-224ENST00000638076 MTCL1Q9Y4B5 1905 aaKnown RBP21.08■□□□□ 0.96
CLN6-224ENST00000638076 DHRS12A0PJE2 317 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 ANKRD28O15084 1053 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 ULK1O75385 1050 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 LEFTY1O75610 366 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 ATP1B2P14415 290 aaPredicted RBP21.07■□□□□ 0.96
CLN6-224ENST00000638076 AKT1P31749 480 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 INPP5AQ14642 412 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 BRAT1Q6PJG6 821 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 UBE2R2Q712K3 238 aaPredicted RBP21.07■□□□□ 0.96
CLN6-224ENST00000638076 SPPL3Q8TCT6 385 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 GBP5Q96PP8 586 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 HEPHQ9BQS7 1158 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 PDE4DIPQ5VU43 2346 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 DYTNA2CJ06 578 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 TTC34A8MYJ7 566 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 MTX2O75431 263 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 EPCAMP16422 314 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 HMGCS1Q01581 520 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 TBCELQ5QJ74 424 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 AHI1Q8N157 1196 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 SCAMP4Q969E2 229 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 ARMC5Q96C12 935 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 CIB1Q99828 191 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 TRPS1Q9UHF7 1281 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 ZNF490Q9ULM2 529 aaPredicted RBP21.07■□□□□ 0.96
CLN6-224ENST00000638076 PCDHGB4Q9UN71 923 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 PCDHGB5Q9Y5G0 923 aa21.07■□□□□ 0.96
CLN6-224ENST00000638076 KIAA0100Q14667 2235 aaKnown RBP21.07■□□□□ 0.96
CLN6-224ENST00000638076 NPPAP01160 153 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 MTHFD1P11586 935 aaKnown RBP21.06■□□□□ 0.96
CLN6-224ENST00000638076 PSMA4P25789 261 aaKnown RBP21.06■□□□□ 0.96
CLN6-224ENST00000638076 WEE1P30291 646 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 SGO1Q5FBB7 561 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 HSD11B1LQ7Z5J1 315 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 PLPP6Q8IY26 295 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 DPP10Q8N608 796 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 FRS2Q8WU20 508 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 EIF3FO00303 357 aaPredicted RBP21.06■□□□□ 0.96
CLN6-224ENST00000638076 SLC28A1O00337 649 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 AP1G1O43747 822 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 TLL1O43897 1013 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 CYP2A6P11509 494 aaPredicted RBP21.06■□□□□ 0.96
CLN6-224ENST00000638076 ZNF30P17039 623 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 JAK1P23458 1154 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 SOX11P35716 441 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 DGKQP52824 942 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 EEFSECP57772 596 aaKnown RBP21.06■□□□□ 0.96
CLN6-224ENST00000638076 BOP1Q14137 746 aaKnown RBP21.06■□□□□ 0.96
CLN6-224ENST00000638076 GK3PQ14409 553 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 ARSIQ5FYB1 569 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 ZNF697Q5TEC3 545 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 FBXO46Q6PJ61 603 aaPredicted RBP21.06■□□□□ 0.96
CLN6-224ENST00000638076 ERMP1Q7Z2K6 904 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 PTRH1Q86Y79 214 aaKnown RBP21.06■□□□□ 0.96
CLN6-224ENST00000638076 VRK3Q8IV63 474 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 MRGPRX3Q96LB0 322 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 SLC32A1Q9H598 525 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 SUFUQ9UMX1 484 aa21.06■□□□□ 0.96
CLN6-224ENST00000638076 C7orf72A4D263 438 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 WDR47O94967 919 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 VIPR1P32241 457 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 IRS1P35568 1242 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 PPIGQ13427 754 aaKnown RBP eCLIP21.05■□□□□ 0.967e-7■□□□□ 9.4
CLN6-224ENST00000638076 GBX1Q14549 363 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 CBX2Q14781 532 aaPredicted RBP21.05■□□□□ 0.96
CLN6-224ENST00000638076 PTGR1Q14914 329 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 PRSS36Q5K4E3 855 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 SERPINA13PQ6UXR4 307 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 GRASPQ7Z6J2 395 aaPredicted RBP21.05■□□□□ 0.96
CLN6-224ENST00000638076 KIAA0907Q7Z7F0 614 aaPredicted RBP21.05■□□□□ 0.96
CLN6-224ENST00000638076 HID1Q8IV36 788 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 SP7Q8TDD2 431 aaPredicted RBP21.05■□□□□ 0.96
CLN6-224ENST00000638076 ING5Q8WYH8 240 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 BADQ92934 168 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 ZNF597Q96LX8 424 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 SLC29A1Q99808 456 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 SLC12A9Q9BXP2 914 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 MUC13Q9H3R2 512 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 FAM83DQ9H4H8 585 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 PARVBQ9HBI1 364 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 ZNHIT2Q9UHR6 403 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 EIF3LQ9Y262 564 aaKnown RBP21.05■□□□□ 0.96
CLN6-224ENST00000638076 GRXCR2A6NFK2 248 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 MANBAO00462 879 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 NUAK1O60285 661 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 ENO2P09104 434 aaPredicted RBP21.05■□□□□ 0.96
CLN6-224ENST00000638076 NCK1P16333 377 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 IL10P22301 178 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 OXTRP30559 389 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 IMPG1Q17R60 797 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 DLEU7Q6UYE1 221 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 RNF165Q6ZSG1 346 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 Q6ZVL8 140 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 RTL10Q7L3V2 364 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 TRIM46Q7Z4K8 759 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 GOLM1Q8NBJ4 401 aa21.05■□□□□ 0.96
CLN6-224ENST00000638076 MTG2Q9H4K7 406 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms