RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 OR52A5Q9H2C5 316 aa11.77□□□□□ -0.53
CACNA1A-250ENST00000637809 SRMSQ9H3Y6 488 aa11.77□□□□□ -0.53
CACNA1A-250ENST00000637809 GOLPH3Q9H4A6 298 aa11.77□□□□□ -0.53
CACNA1A-250ENST00000637809 TFB2MQ9H5Q4 396 aaKnown RBP11.77□□□□□ -0.53
CACNA1A-250ENST00000637809 C10orf88Q9H8K7 445 aa11.77□□□□□ -0.53
CACNA1A-250ENST00000637809 NHEJ1Q9H9Q4 299 aaPredicted RBP11.77□□□□□ -0.53
CACNA1A-250ENST00000637809 SLAMF7Q9NQ25 335 aa11.77□□□□□ -0.53
CACNA1A-250ENST00000637809 ABHD10Q9NUJ1 306 aa11.77□□□□□ -0.53
CACNA1A-250ENST00000637809 GPR83Q9NYM4 423 aa11.77□□□□□ -0.53
CACNA1A-250ENST00000637809 HEBP2Q9Y5Z4 205 aa11.77□□□□□ -0.53
CACNA1A-250ENST00000637809 TNRC6AQ8NDV7 1962 aaKnown RBP11.77□□□□□ -0.53
CACNA1A-250ENST00000637809 IGLV3-16A0A075B6K0 115 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 C17orf113A0A1B0GUU1 675 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 GSAPA4D1B5 854 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 C5orf60A6NFR6 353 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 C2orf81A6NN90 581 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 HACD1B0YJ81 288 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 ZNF749O43361 778 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 CLDN1O95832 211 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 PVRP15151 417 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 VARSP26640 1264 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 RBL1P28749 1068 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 MARCKSL1P49006 195 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 ZNF140P52738 457 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 RAPSNQ13702 412 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 TRIM14Q14142 442 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 KRT33BQ14525 404 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 PLEKHN1Q494U1 663 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 VWA5B1Q5TIE3 1220 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 CDHR3Q6ZTQ4 885 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 MICALCLQ6ZW33 695 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 KATNAL2Q8IYT4 538 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 NXPE1Q8N323 547 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 OR52E1Q8NGJ3 308 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 OR13C4Q8NGS5 318 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 PRR7Q8TB68 274 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 SNRNP40Q96DI7 357 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 DCUN1D1Q96GG9 259 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 CCDC42Q96M95 316 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 FERD3LQ96RJ6 166 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 DPH2Q9BQC3 489 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 APOL2Q9BQE5 337 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 KLHL25Q9H0H3 589 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 COG4Q9H9E3 785 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 ZNHIT6Q9NWK9 470 aaKnown RBP11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 ERRFI1Q9UJM3 462 aaPredicted RBP11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 SERTAD3Q9UJW9 196 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 INTUQ9ULD6 942 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 ALG6Q9Y672 507 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 MED13Q9UHV7 2174 aa11.76□□□□□ -0.53
CACNA1A-250ENST00000637809 CCDC66A2RUB6 948 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 E7EQ34 232 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 HCRTR1O43613 425 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 MFAP3LO75121 409 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 ANXA9O76027 345 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 CBX6O95503 412 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 LDLRP01130 860 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 ATP1B2P14415 290 aaPredicted RBP11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 COL8A1P27658 744 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 PDHA2P29803 388 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 GEMP55040 296 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 RRADP55042 308 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 HADHBP55084 474 aaKnown RBP11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 CRB2Q5IJ48 1285 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 ZNF787Q6DD87 383 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 DENND5AQ6IQ26 1287 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 BBS12Q6ZW61 710 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 MRGPREQ86SM8 312 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 AMIGO1Q86WK6 493 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 RCOR2Q8IZ40 523 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 ADGRF3Q8IZF5 1079 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 PHC3Q8NDX5 983 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 COPS8Q99627 209 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 DHRS4Q9BTZ2 278 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 SLC29A3Q9BZD2 475 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 FAM96AQ9H5X1 160 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 XKR8Q9H6D3 395 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 FAM60AQ9NP50 221 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 ACTR10Q9NZ32 417 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 C5AR2Q9P296 337 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 CRLS1Q9UJA2 301 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 G3BP2Q9UN86 482 aaKnown RBP11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 HIVEP3Q5T1R4 2406 aa11.75□□□□□ -0.53
CACNA1A-250ENST00000637809 C2orf74A8MZ97 194 aa11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 C9J4A7 227 aa11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 CCL22O00626 93 aa11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 ZRANB2O95218 330 aaKnown RBP eCLIP11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 TPM3P06753 285 aa11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 CTSBP07858 339 aa11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 CBSLP0DN79 551 aa11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 RALBP11234 206 aa11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 PSMB4P28070 264 aa11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 OTX2P32243 289 aa11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 CBSP35520 551 aa11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 DCTP40126 519 aa11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 GABRA4P48169 554 aa11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 CD151P48509 253 aa11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 CDKN1CP49918 316 aaPredicted RBP11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 TMPRSS15P98073 1019 aa11.74□□□□□ -0.53
CACNA1A-250ENST00000637809 BOP1Q14137 746 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms