RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 SERGEFQ9UGK8 458 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 SH3GLB1Q9Y371 365 aa15.24■□□□□ 0.03
CLN8-209ENST00000635970 SPAG17Q6Q759 2223 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 CCDC163A0A0D9SF12 145 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 FAM95CA0A1B0GW59 222 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 TTC24A2A3L6 582 aaPredicted RBP15.23■□□□□ 0.03
CLN8-209ENST00000635970 PLK4O00444 970 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 HRO43593 1189 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 RBP1P09455 135 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 NFKB1P19838 968 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 RECQLP46063 649 aaPredicted RBP15.23■□□□□ 0.03
CLN8-209ENST00000635970 CCR10P46092 362 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 SCNN1BP51168 640 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 SLC12A2P55011 1212 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 OLIG2Q13516 323 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 INPP5AQ14642 412 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 TSTD2Q5T7W7 516 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 ISLR2Q6UXK2 745 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 SLC41A1Q8IVJ1 513 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 PGBD5Q8N414 524 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 FAM156AQ8NDB6 213 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 ATOH1Q92858 354 aaPredicted RBP15.23■□□□□ 0.03
CLN8-209ENST00000635970 ABTB1Q969K4 478 aaPredicted RBP15.23■□□□□ 0.03
CLN8-209ENST00000635970 PPWD1Q96BP3 646 aaKnown RBP15.23■□□□□ 0.03
CLN8-209ENST00000635970 NXNL1Q96CM4 212 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 ISOC1Q96CN7 298 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 SGF29Q96ES7 293 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 SLC45A3Q96JT2 553 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 SLC29A1Q99808 456 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 PCDHAC1Q9H158 963 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 NOL11Q9H8H0 719 aaKnown RBP15.23■□□□□ 0.03
CLN8-209ENST00000635970 FBRSQ9HAH7 460 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 IL36AQ9UHA7 158 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 CNOT6Q9ULM6 557 aaKnown RBP15.23■□□□□ 0.03
CLN8-209ENST00000635970 PCDHGA2Q9Y5H1 932 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 THADAQ6YHU6 1953 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 ABCA7Q8IZY2 2146 aa15.23■□□□□ 0.03
CLN8-209ENST00000635970 FBP2O00757 339 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 MRASO14807 208 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 INSIG1O15503 277 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 LEFTY1O75610 366 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 ANXA9O76027 345 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 DNTTP04053 509 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 ACADMP11310 421 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 BCKDHBP21953 392 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 IL10P22301 178 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 P2RY2P41231 377 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 ABCG1P45844 678 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 TPMTP51580 245 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 ATXN3P54252 364 aaPredicted RBP15.22■□□□□ 0.03
CLN8-209ENST00000635970 MAXP61244 160 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 SNRPD1P62314 119 aaKnown RBP15.22■□□□□ 0.03
CLN8-209ENST00000635970 BNIP2Q12982 314 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 AGKQ53H12 422 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 ARSIQ5FYB1 569 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 AGAP9Q5VTM2 703 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 PATL1Q86TB9 770 aaKnown RBP15.22■□□□□ 0.03
CLN8-209ENST00000635970 METTL3Q86U44 580 aaKnown RBP15.22■□□□□ 0.03
CLN8-209ENST00000635970 FAM124AQ86V42 546 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 AADATQ8N5Z0 425 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 MARK4Q96L34 752 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 ZNF599Q96NL3 588 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 DOK1Q99704 481 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 CIB1Q99828 191 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 C9orf16Q9BUW7 83 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 KCNH6Q9H252 994 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 MUC13Q9H3R2 512 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 TBC1D23Q9NUY8 699 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 USP36Q9P275 1121 aaKnown RBP15.22■□□□□ 0.03
CLN8-209ENST00000635970 EVLQ9UI08 416 aaPredicted RBP15.22■□□□□ 0.03
CLN8-209ENST00000635970 hCG_2014768A0A024R1R8 64 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 A0A1W2PP55 124 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 AKAP10O43572 662 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 LILRB5O75023 590 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 RPP40O75818 363 aaKnown RBP15.22■□□□□ 0.03
CLN8-209ENST00000635970 IPO13O94829 963 aaKnown RBP15.22■□□□□ 0.03
CLN8-209ENST00000635970 IGSF6O95976 241 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 FCGR1AP12314 374 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 ZNF12P17014 697 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 SAT1P21673 171 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 CCNCP24863 283 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 GABRB3P28472 473 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 ZNF235Q14590 738 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 ZNF829Q3KNS6 432 aaPredicted RBP15.22■□□□□ 0.03
CLN8-209ENST00000635970 C6orf10Q5SRN2 563 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 HMBOX1Q6NT76 420 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 TTC33Q6PID6 262 aaPredicted RBP15.22■□□□□ 0.03
CLN8-209ENST00000635970 LRRC49Q8IUZ0 686 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 FAM47BQ8NA70 645 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 PPHLN1Q8NEY8 458 aaKnown RBP15.22■□□□□ 0.03
CLN8-209ENST00000635970 BORCS5Q969J3 196 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 TMIGD2Q96BF3 282 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 HEPHQ9BQS7 1158 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 PALMDQ9NP74 551 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 TMEM9Q9P0T7 183 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 SEPT3Q9UH03 358 aa15.22■□□□□ 0.03
CLN8-209ENST00000635970 MBD1Q9UIS9 605 aaPredicted RBP15.22■□□□□ 0.03
CLN8-209ENST00000635970 WDR87Q6ZQQ6 2873 aa15.21■□□□□ 0.03
CLN8-209ENST00000635970 IGHV1OR15-9A0A0B4J2B8 117 aa15.21■□□□□ 0.03
CLN8-209ENST00000635970 KPNA3O00505 521 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms