RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 A0A1B0GVC2 190 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 KANSL1LA0AUZ9 987 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ASPDHA6ND91 283 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 GOLGA6L9A6NEM1 432 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 TMEM178BH3BS89 294 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 WNT9BO14905 357 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ATP2A1O14983 1001 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ANKRD28O15084 1053 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 IPO8O15397 1037 aaKnown RBP1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNHIT1O43257 154 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 CIDEAO60543 219 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 PAGE4O60829 102 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 JRKO75564 520 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 BMP10O95393 424 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 NR3C1P04150 777 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 HIST1H2ABP04908 130 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 HOXB5P09067 269 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 PRG2P13727 222 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 HIST1H2ADP20671 130 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 S1PR1P21453 382 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 UBA1P22314 1058 aaKnown RBP1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 MCM3P25205 808 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 BSGP35613 385 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 CDKN1AP38936 164 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 MSH2P43246 934 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 PSMC4P43686 418 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 NR0B1P51843 470 aaKnown RBP1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 FUT6P51993 359 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 RAD23BP54727 409 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 SNX16P57768 344 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 LINC01547P58512 204 aaPredicted RBP1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 PRAMEP78395 509 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 TFAP4Q01664 338 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 SREBF2Q12772 1141 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 PLA2G7Q13093 441 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 MAMLD1Q13495 774 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 MEP1AQ16819 746 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 KRT24Q2M2I5 525 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 MYLK3Q32MK0 819 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ACCSLQ4AC99 568 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF805Q5CZA5 627 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 CXorf66Q5JRM2 361 aaPredicted RBP1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 LRIF1Q5T3J3 769 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 LCE1CQ5T751 118 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 LCE1BQ5T7P3 118 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 NDUFAF5Q5TEU4 345 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ACSM2BQ68CK6 577 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 C18orf63Q68DL7 685 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ITPRIPL1Q6GPH6 555 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF280DQ6N043 979 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 TRNP1Q6NT89 227 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 FAM180BQ6P0A1 224 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ARHGAP11AQ6P4F7 1023 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 TMEM154Q6P9G4 183 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 INO80CQ6PI98 192 aaPredicted RBP1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 CYP20A1Q6UW02 462 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ZNF852Q6ZMS4 543 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 C4orf50Q6ZRC1 276 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 FOXL2NBQ6ZUU3 175 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 PLEKHM3Q6ZWE6 761 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 STXBP4Q6ZWJ1 553 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 TMTC3Q6ZXV5 915 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 DPPA4Q7L190 304 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 HIST3H2AQ7L7L0 130 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 PXKQ7Z7A4 578 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 DSG4Q86SJ6 1040 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 TMEM219Q86XT9 240 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 FOXRED2Q8IWF2 684 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ARHGAP12Q8IWW6 846 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ADSSL1Q8N142 457 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 BEST3Q8N1M1 668 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 CIARTQ8N365 385 aaPredicted RBP1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 C17orf53Q8N3J3 647 aaPredicted RBP1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 DNAJC22Q8N4W6 341 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 SRBD1Q8N5C6 995 aaKnown RBP1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 GBGT1Q8N5D6 347 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 PCDH20Q8N6Y1 951 aaKnown RBP1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 CNBD1Q8NA66 436 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 TEX19Q8NA77 164 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ACVR1CQ8NER5 493 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 SLC24A4Q8NFF2 622 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 RDM1Q8NG50 284 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 OR1J2Q8NGS2 313 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 GRAPLQ8TC17 118 aaPredicted RBP1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 SCFD2Q8WU76 684 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 SEMA4DQ92854 862 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ABTB1Q969K4 478 aaPredicted RBP1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 PHF21AQ96BD5 680 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ARHGEF26Q96DR7 871 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ELMOD3Q96FG2 381 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 NSL1Q96IY1 281 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 PRMT6Q96LA8 375 aaPredicted RBP1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 C1orf74Q96LT6 269 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 NR1H4Q96RI1 486 aaPredicted RBP1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ATOH8Q96SQ7 321 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 MAP7D2Q96T17 732 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 ACOX2Q99424 681 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 DDOQ99489 341 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 PSD2Q9BQI7 771 aa1.06□□□□□ -2.24
SMARCB1-209ENST00000635578 NEURL2Q9BR09 285 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms