RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-240ENST00000635392 SLC5A8Q8N695 610 aa5.89□□□□□ -1.47
SMARCA2-240ENST00000635392 UTP15Q8TED0 518 aaKnown RBP5.89□□□□□ -1.47
SMARCA2-240ENST00000635392 LRRC3BQ96PB8 259 aa5.89□□□□□ -1.47
SMARCA2-240ENST00000635392 MS4A10Q96PG2 267 aa5.89□□□□□ -1.47
SMARCA2-240ENST00000635392 OR6C1Q96RD1 312 aa5.89□□□□□ -1.47
SMARCA2-240ENST00000635392 MTERF1Q99551 399 aaKnown RBP5.89□□□□□ -1.47
SMARCA2-240ENST00000635392 RBM38Q9H0Z9 239 aaKnown RBP5.89□□□□□ -1.47
SMARCA2-240ENST00000635392 PIH1D3Q9NQM4 214 aaKnown RBP5.89□□□□□ -1.47
SMARCA2-240ENST00000635392 CHCHD3Q9NX63 227 aaKnown RBP5.89□□□□□ -1.47
SMARCA2-240ENST00000635392 KLHL20Q9Y2M5 609 aa5.89□□□□□ -1.47
SMARCA2-240ENST00000635392 PXDNQ92626 1479 aa5.89□□□□□ -1.47
SMARCA2-240ENST00000635392 H0Y626 953 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 CCDC188H7C350 402 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 PLK4O00444 970 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 OR10H2O60403 315 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 HSPA5P11021 654 aaKnown RBP5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 ERCC2P18074 760 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 S1PR1P21453 382 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 LIMK1P53667 647 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 CDK3Q00526 305 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 RGMBQ6NW40 437 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 PELI3Q8N2H9 469 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 CLIP4Q8N3C7 705 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 CAMKVQ8NCB2 501 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 KCNH5Q8NCM2 988 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 OR14A16Q8NHC5 309 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 DEPDC1BQ8WUY9 529 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 ASB5Q8WWX0 329 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 NXNL1Q96CM4 212 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 PRMT6Q96LA8 375 aaPredicted RBP5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 SLITRK6Q9H5Y7 841 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 GRPEL1Q9HAV7 217 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 TMEM30AQ9NV96 361 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 KLHL9Q9P2J3 617 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 PCDHAC2Q9Y5I4 1007 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 SNX9Q9Y5X1 595 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 KTN1Q86UP2 1357 aaKnown RBP5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 DISP3Q9P2K9 1392 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 SHPRHQ149N8 1683 aa5.88□□□□□ -1.47
SMARCA2-240ENST00000635392 TRIM77I1YAP6 450 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 PTGESO14684 152 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 MID1O15344 667 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 SSX4O60224 188 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 OR52Z1P0C646 297 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 FDPSP14324 419 aaKnown RBP5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 ITGB8P26012 769 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 TLX1P31314 330 aaPredicted RBP5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 CTSCP53634 463 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 ZNF155Q12901 538 aaPredicted RBP5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 PTPRCAPQ14761 206 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 NFATC4Q14934 902 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 TNIP1Q15025 636 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 CAVIN1Q6NZI2 390 aaKnown RBP5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 MFSD6Q6ZSS7 791 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 METTL23Q86XA0 190 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 ZNF114Q8NC26 417 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 BBS10Q8TAM1 723 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 ABTB1Q969K4 478 aaPredicted RBP5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 ATP6V1E2Q96A05 226 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 SCMH1Q96GD3 660 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 JAKMIP1Q96N16 626 aaKnown RBP5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 SLA2Q9H6Q3 261 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 RHCGQ9UBD6 479 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 PTPRCP08575 1304 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 USP6P35125 1406 aa5.87□□□□□ -1.47
SMARCA2-240ENST00000635392 USP32Q8NFA0 1604 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 CPSF1Q10570 1443 aaKnown RBP5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 EDC4Q6P2E9 1401 aaKnown RBP5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 ANKRD36BQ8N2N9 1353 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 PDS5AQ29RF7 1337 aaKnown RBP5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 TTC21BQ7Z4L5 1316 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 LINC01553A4QN01 128 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 ANKUB1A6NFN9 424 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 ZBTB43O43298 467 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 SERPINI2O75830 405 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 CLDN14O95500 239 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 ZNF12P17014 697 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 HOXC13P31276 330 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 CTNNA1P35221 906 aaKnown RBP5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 SNRPEP62304 92 aaKnown RBP5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 RBPJQ06330 500 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 NR1D2Q14995 579 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 EFHC1Q5JVL4 640 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 MPP7Q5T2T1 576 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 PLA2G4FQ68DD2 849 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 ZNF425Q6IV72 752 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 C1QL2Q7Z5L3 287 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 GPR180Q86V85 440 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 TMEM173Q86WV6 379 aaPredicted RBP5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 C1orf87Q8N0U7 546 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 PAPD5Q8NDF8 572 aaKnown RBP5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 OR2AJ1Q8NGZ0 328 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 FAM216AQ8WUB2 273 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 ZFAND2BQ8WV99 257 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 VMP1Q96GC9 406 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 QRFPRQ96P65 431 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 MOV10L1Q9BXT6 1211 aaKnown RBP5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 RSPH9Q9H1X1 276 aaPredicted RBP5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 ABCF3Q9NUQ8 709 aa5.86□□□□□ -1.47
SMARCA2-240ENST00000635392 DNAJB9Q9UBS3 223 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms