RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 PMS2P54278 862 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 RRP1P56182 461 aaKnown RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SNAP25P60880 206 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 RPS6P62753 249 aaKnown RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 TFAP4Q01664 338 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 PMPCAQ10713 525 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 GRIK3Q13003 919 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 PRPF4BQ13523 1007 aaKnown RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 STIM1Q13586 685 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 RUNX2Q13950 521 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 BAATQ14032 418 aaPredicted RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 DRAP1Q14919 205 aaPredicted RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 ADIPOQQ15848 244 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 ASIC2Q16515 512 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 TMEM266Q2M3C6 531 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 ASTE1Q2TB18 679 aaPredicted RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 PCGF3Q3KNV8 242 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 ZSCAN23Q3MJ62 389 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 ALG10Q5BKT4 473 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 BMP2KLQ5H9B9 411 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 ALG10BQ5I7T1 473 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 C6orf141Q5SZD1 244 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 DAB2IPQ5VWQ8 1189 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 PMS2CLQ68D20 193 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 KIAA0930Q6ICG6 404 aaPredicted RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 DEF8Q6ZN54 512 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 FAM57BQ71RH2 274 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 TMCO2Q7Z6W1 182 aaPredicted RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SERPINA11Q86U17 422 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SERINC5Q86VE9 423 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 TDRPQ86YL5 185 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 DDIASQ8IXT1 998 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 HACE1Q8IYU2 909 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 ADGRF4Q8IZF3 695 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 ZCCHC9Q8N567 271 aaKnown RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SLC25A41Q8N5S1 370 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 DPP10Q8N608 796 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 IL17RCQ8NAC3 791 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 AVL9Q8NBF6 648 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 KCTD6Q8NC69 237 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 RASSF8Q8NHQ8 419 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 PPTC7Q8NI37 304 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 CHURC1Q8WUH1 139 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 PRPF31Q8WWY3 499 aaKnown RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 ATOH1Q92858 354 aaPredicted RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SNAPC3Q92966 411 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 RNF183Q96D59 192 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SAT2Q96F10 170 aaPredicted RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 OR2A14Q96R47 310 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 BBS4Q96RK4 519 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 FIZ1Q96SL8 496 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SEPT5Q99719 369 aaPredicted RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 TMEM47Q9BQJ4 181 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 MTG1Q9BT17 334 aaPredicted RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 C1QTNF1Q9BXJ1 281 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 NUF2Q9BZD4 464 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 OR10A4Q9H209 315 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 IL25Q9H293 177 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 RABEP2Q9H5N1 569 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 UBE2ZQ9H832 354 aaPredicted RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 RANGRFQ9HD47 186 aaPredicted RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SPAG4Q9NPE6 437 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SLC35C2Q9NQQ7 365 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 OGFRQ9NZT2 677 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 CTNNAL1Q9UBT7 734 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SEL1LQ9UBV2 794 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 CNOT8Q9UFF9 292 aaKnown RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 SEC63Q9UGP8 760 aaKnown RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 CCPG1Q9ULG6 757 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 NENFQ9UMX5 172 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 LSM4Q9Y4Z0 139 aaKnown RBP2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 HS3ST3B1Q9Y662 390 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 FAM169AQ9Y6X4 670 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 EVPLQ92817 2033 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 FAM186AA6NE01 2351 aa2.5□□□□□ -2.01
SMARCB1-208ENST00000634926 FANCMQ8IYD8 2048 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 RAD50Q92878 1312 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 BAZ2BQ9UIF8 2168 aaKnown RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 AKAP13Q12802 2813 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 A0A0U1RQF3 1178 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 TYW5A2RUC4 315 aaKnown RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 OR2A25A4D2G3 310 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 HSPB2A8KAH6 182 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 HSPB6O14558 160 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 HS6ST1O60243 411 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 KLK8O60259 260 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 UGDHO60701 494 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 TBX10O75333 385 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 DAB1O75553 588 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 NKX2-2O95096 273 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 SRPRAP08240 638 aaKnown RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 SUPT20HL2P0C7V6 817 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 MYZAPP0CAP1 466 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 ZNF286BP0CG31 522 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 TSPY3P0CV98 308 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 TSPY8P0CW00 308 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 CTSAP10619 480 aa2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 HSPD1P10809 573 aaKnown RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 TOP1P11387 765 aaKnown RBP2.49□□□□□ -2.01
SMARCB1-208ENST00000634926 GLULP15104 373 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms