RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 DPEP2Q9H4A9 486 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 SMURF1Q9HCE7 757 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 KLC4Q9NSK0 619 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 PPARGC1AQ9UBK2 798 aaKnown RBP4.8□□□□□ -1.64
LINC00550-201ENST00000629293 OR1A2Q9Y585 309 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 ESPL1Q14674 2120 aa4.8□□□□□ -1.64
LINC00550-201ENST00000629293 EME2A4GXA9 379 aaPredicted RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 B4DGG1 531 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 K7ENP7 123 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 MGRN1O60291 552 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 IGLV3-25P01717 112 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 AMY2AP04746 511 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 KRT3P12035 628 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 AMY2BP19961 511 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 KDELR1P24390 212 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 FOXN2P32314 431 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 GPX6P59796 221 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 OTUD4Q01804 1114 aaKnown RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 GNA12Q03113 381 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 TMED2Q15363 201 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 RAB6CQ53S08 254 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 CDPF1Q6NVV7 123 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 SCYL2Q6P3W7 929 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 INO80CQ6PI98 192 aaPredicted RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 ARHGEF18Q6ZSZ5 1173 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 SPATA21Q7Z572 469 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 SRRM1Q8IYB3 904 aaKnown RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 ANKRD42Q8N9B4 389 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 KYQ8NBH2 561 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 LSM14AQ8ND56 463 aaKnown RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 FAM46DQ8NEK8 389 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 TMIEQ8NEW7 156 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 ACTL9Q8TC94 416 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 MAGEC3Q8TD91 643 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 MGARPQ8TDB4 240 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 CXorf40AQ8TE69 158 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 MZB1Q8WU39 189 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 CPT1BQ92523 772 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 SLC2A13Q96QE2 648 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 NCAPGQ9BPX3 1015 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 TMEM121Q9BTD3 319 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 MAGEB5Q9BZ81 275 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 DPH1Q9BZG8 443 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 RAB6CQ9H0N0 254 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 CASS4Q9NQ75 786 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 MBNL1Q9NR56 388 aaKnown RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 SENP1Q9P0U3 644 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 SLC24A2Q9UI40 661 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 GPR34Q9UPC5 381 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 TBC1D30Q9Y2I9 924 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 MUC22E2RYF6 1773 aaPredicted RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 C2CD3Q4AC94 2353 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 CCDC187A0A096LP49 1063 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 EXOC1LA0A1B0GW35 172 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 TYROBPO43914 113 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 DAB1O75553 588 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 TM7SF2O76062 418 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 PCCBP05166 539 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 GP1BAP07359 652 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 ALDH4A1P30038 563 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 UGT1A5P35504 534 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 PCK1P35558 622 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 SERPINH1P50454 418 aaKnown RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 SNX16P57768 344 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 NCALDP61601 193 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 BNIP1Q12981 228 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 EIF2B5Q13144 721 aaKnown RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 DPY19L1Q2PZI1 675 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 ANKRD22Q5VYY1 191 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 KIAA1161Q6NSJ0 714 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 TRNP1Q6NT89 227 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 LINC00114Q6XXX2 140 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 KYAT3Q6YP21 454 aaKnown RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 CENPUQ71F23 418 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 SLC26A9Q7LBE3 791 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 TAF8Q7Z7C8 310 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 PCGF5Q86SE9 256 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 ZFAND4Q86XD8 727 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 GALNT6Q8NCL4 622 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 NAT6Q93015 286 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 HAUS1Q96CS2 278 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 PEBP4Q96S96 227 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 MIPEPQ99797 713 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 STRADBQ9C0K7 418 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 SSU72Q9NP77 194 aaKnown RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 ARL2BPQ9Y2Y0 163 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 CFAP73A6NFT4 308 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 RASA4BC9J798 803 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 APOC4-APOC2K7ER74 178 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 RASA4O43374 803 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 CST8O60676 142 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 TMEM63AO94886 807 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 SUN1O94901 812 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 APOC2P02655 101 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 CD48P09326 243 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 ITGB7P26010 798 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 RPL22P35268 128 aaKnown RBP4.79□□□□□ -1.64
LINC00550-201ENST00000629293 PREPP48147 710 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 RHOAP61586 193 aa4.79□□□□□ -1.64
LINC00550-201ENST00000629293 ELF3P78545 371 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms