RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 TCF20Q9UGU0 1960 aaKnown RBP21.61■■□□□ 1.05
PNKP-220ENST00000627232 PABPN1LA6NDY0 278 aaKnown RBP21.6■■□□□ 1.05
PNKP-220ENST00000627232 H3BNX3 289 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 SLC28A1O00337 649 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 ACOT8O14734 319 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 SLCO2B1O94956 709 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 GDF5P43026 501 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 MS4A2Q01362 244 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 FOXM1Q08050 763 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 BOP1Q14137 746 aaKnown RBP21.6■■□□□ 1.05
PNKP-220ENST00000627232 LRRK1Q38SD2 2015 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 POM121L1PQ3SYA9 428 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 PDE4DIPQ5VU43 2346 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 SERPINA13PQ6UXR4 307 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 TMEM184AQ6ZMB5 413 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 ZNF765Q7L2R6 523 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 RETREG3Q86VR2 466 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 MINDY1Q8N5J2 469 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 DCBLD1Q8N8Z6 715 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 TERB1Q8NA31 727 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 GDPD5Q8WTR4 605 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 ELMO1Q92556 727 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 ARRDC3Q96B67 414 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 DTD2Q96FN9 168 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 PPP1R16AQ96I34 528 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 PPP3R2Q96LZ3 170 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 GPATCH1Q9BRR8 931 aaKnown RBP21.6■■□□□ 1.05
PNKP-220ENST00000627232 TMEM245Q9H330 911 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 ZFP14Q9HCL3 533 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 GID8Q9NWU2 228 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 CD300AQ9UGN4 299 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 DYTNA2CJ06 578 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 SPINT1O43278 529 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 RPSAP08865 295 aaKnown RBP21.6■■□□□ 1.05
PNKP-220ENST00000627232 NME5P56597 212 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 KCNK10P57789 538 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 FCHO2Q0JRZ9 810 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 RCAN2Q14206 197 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 TRIM25Q14258 630 aaKnown RBP21.6■■□□□ 1.05
PNKP-220ENST00000627232 ZNF234Q14588 700 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 GRIN2CQ14957 1233 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 SPATS1Q496A3 300 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 VRK3Q8IV63 474 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 FNDC5Q8NAU1 212 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 HIPK4Q8NE63 616 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 MCOLN3Q8TDD5 553 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 PPP2R3CQ969Q6 453 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 SPDL1Q96EA4 605 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 NKX2-4Q9H2Z4 354 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 VCX3BQ9H321 246 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 EPHX3Q9H6B9 360 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 MAP10Q9P2G4 905 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 PSMD13Q9UNM6 376 aa21.6■■□□□ 1.05
PNKP-220ENST00000627232 PRRC2BQ5JSZ5 2229 aaKnown RBP21.59■■□□□ 1.05
PNKP-220ENST00000627232 A0A1W2PP18 115 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 FAM234BA2RU67 622 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 LSM1O15116 133 aaKnown RBP21.59■■□□□ 1.05
PNKP-220ENST00000627232 MTX2O75431 263 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 SLC22A3O75751 556 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 HLA-EP13747 358 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 MAGEA10P43363 369 aaPredicted RBP21.59■■□□□ 1.05
PNKP-220ENST00000627232 ZFP36L2P47974 494 aaKnown RBP21.59■■□□□ 1.05
PNKP-220ENST00000627232 PRLHRP49683 370 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 ABRAXAS2Q15018 415 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 VPS26BQ4G0F5 336 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 TANGO2Q6ICL3 276 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 VITQ6UXI7 678 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 RNF111Q6ZNA4 994 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 MBOAT1Q6ZNC8 495 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 RNF148Q8N7C7 305 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 PBX4Q9BYU1 374 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 EPS15L1Q9UBC2 864 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 CDH7Q9ULB5 785 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 CCL27Q9Y4X3 112 aa21.59■■□□□ 1.05
PNKP-220ENST00000627232 GRXCR2A6NFK2 248 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 AREL1O15033 823 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 RGS14O43566 566 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 ATG13O75143 517 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 CLDN9O95484 217 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 MAPK9P45984 424 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 SLC6A12P48065 614 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 CREB5Q02930 508 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 MAD2L1Q13257 205 aaPredicted RBP21.58■■□□□ 1.04
PNKP-220ENST00000627232 NR6A1Q15406 480 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 GGTA1PQ4G0N0 100 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 TMEM52BQ4KMG9 183 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 PPP2R2DQ66LE6 453 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 FBXL19Q6PCT2 694 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 LAYNQ6UX15 382 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 TRIM46Q7Z4K8 759 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 GALNT13Q8IUC8 556 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 RASGEF1AQ8N9B8 481 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 BHLHE22Q8NFJ8 381 aaPredicted RBP21.58■■□□□ 1.04
PNKP-220ENST00000627232 SKA2Q8WVK7 121 aaPredicted RBP21.58■■□□□ 1.04
PNKP-220ENST00000627232 GLMNQ92990 594 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 MAGEB10Q96LZ2 347 aaPredicted RBP21.58■■□□□ 1.04
PNKP-220ENST00000627232 FAM129BQ96TA1 746 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 C6orf203Q9P0P8 240 aaPredicted RBP21.58■■□□□ 1.04
PNKP-220ENST00000627232 ABCD2Q9UBJ2 740 aa21.58■■□□□ 1.04
PNKP-220ENST00000627232 MSRAQ9UJ68 235 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms