RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 ZNF644Q9H582 1327 aaPredicted RBP3.02□□□□□ -1.93
VBP1-204ENST00000625964 A0A1W2PRB8 838 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 ANKRD18BA2A2Z9 1011 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 OR2A25A4D2G3 310 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 PLA2G4BP0C869 781 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 CSH1P0DML2 217 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 CSH2P0DML3 217 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 ITGA3P26006 1051 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 NRIP1P48552 1158 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 KCNJ10P78508 379 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 WTAPQ15007 396 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 MEA1Q16626 185 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 RILPL1Q5EBL4 403 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 HYIQ5T013 277 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 ARHGEF16Q5VV41 709 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 LDB1Q86U70 411 aaPredicted RBP3.02□□□□□ -1.93
VBP1-204ENST00000625964 KBTBD6Q86V97 674 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 TAGAPQ8N103 731 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 CPSF7Q8N684 471 aaKnown RBP3.02□□□□□ -1.93
VBP1-204ENST00000625964 ZNF383Q8NA42 475 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 OR1J1Q8NGS3 322 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 TMEM190Q8WZ59 177 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 CALML4Q96GE6 196 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 OR6C1Q96RD1 312 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 C16orf70Q9BSU1 422 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 KIFC3Q9BVG8 833 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 FNDC11Q9BVV2 318 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 PPIL3Q9H2H8 161 aaKnown RBP3.02□□□□□ -1.93
VBP1-204ENST00000625964 KCNK15Q9H427 330 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 OSGEPL1Q9H4B0 414 aa3.02□□□□□ -1.93
VBP1-204ENST00000625964 hCG_1807616A0A1W2PRN6 198 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 DNM1LO00429 736 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 PSMD14O00487 310 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 ZNF197O14709 1029 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 PRAMEF11O60813 436 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 AVILO75366 819 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 CREG1O75629 220 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 CLPTM1O96005 669 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 NGFP01138 241 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 GJA1P17302 382 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 ALOX12P18054 663 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 GABRA5P31644 462 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 CEACAM8P31997 349 aaPredicted RBP3.01□□□□□ -1.93
VBP1-204ENST00000625964 SIRPAP78324 504 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 PNRC1Q12796 327 aaPredicted RBP3.01□□□□□ -1.93
VBP1-204ENST00000625964 CUL4AQ13619 759 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 GTDC1Q4AE62 458 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 IGSF11Q5DX21 431 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 FFAR4Q5NUL3 377 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 GRTP1Q5TC63 336 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 ZNF554Q86TJ5 538 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 FBXO39Q8N4B4 442 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 AFAP1Q8N556 730 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 MCUQ8NE86 351 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 OR2AJ1Q8NGZ0 328 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 CDRT15Q96T59 188 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 RTP3Q9BQQ7 232 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 ACKR4Q9NPB9 350 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 OSER1Q9NX31 292 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 PSD3Q9NYI0 1048 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 WSB2Q9NYS7 404 aaPredicted RBP3.01□□□□□ -1.93
VBP1-204ENST00000625964 GPR34Q9UPC5 381 aa3.01□□□□□ -1.93
VBP1-204ENST00000625964 IGKV6D-41A0A0C4DH26 115 aa3□□□□□ -1.93
VBP1-204ENST00000625964 XRCC3O43542 346 aa3□□□□□ -1.93
VBP1-204ENST00000625964 TRMUO75648 421 aaKnown RBP3□□□□□ -1.93
VBP1-204ENST00000625964 IGLV1-44P01699 117 aa3□□□□□ -1.93
VBP1-204ENST00000625964 SAT1P21673 171 aa3□□□□□ -1.93
VBP1-204ENST00000625964 ACSL1P33121 698 aa3□□□□□ -1.93
VBP1-204ENST00000625964 MATR3P43243 847 aaKnown RBP eCLIP3□□□□□ -1.93
VBP1-204ENST00000625964 CX3CL1P78423 397 aa3□□□□□ -1.93
VBP1-204ENST00000625964 CDK3Q00526 305 aa3□□□□□ -1.93
VBP1-204ENST00000625964 LGALS3BPQ08380 585 aa3□□□□□ -1.93
VBP1-204ENST00000625964 KRT79Q5XKE5 535 aa3□□□□□ -1.93
VBP1-204ENST00000625964 DHRS7BQ6IAN0 325 aaPredicted RBP3□□□□□ -1.93
VBP1-204ENST00000625964 FIGLAQ6QHK4 219 aa3□□□□□ -1.93
VBP1-204ENST00000625964 NOTCH2NLQ7Z3S9 236 aa3□□□□□ -1.93
VBP1-204ENST00000625964 LYG1Q8N1E2 194 aa3□□□□□ -1.93
VBP1-204ENST00000625964 PPFIBP2Q8ND30 876 aa3□□□□□ -1.93
VBP1-204ENST00000625964 HCAR2Q8TDS4 363 aa3□□□□□ -1.93
VBP1-204ENST00000625964 RNF128Q8TEB7 428 aa3□□□□□ -1.93
VBP1-204ENST00000625964 JAKMIP2Q96AA8 810 aa3□□□□□ -1.93
VBP1-204ENST00000625964 NSUN4Q96CB9 384 aaKnown RBP3□□□□□ -1.93
VBP1-204ENST00000625964 SGK494Q96LW2 274 aa3□□□□□ -1.93
VBP1-204ENST00000625964 DPAGT1Q9H3H5 408 aa3□□□□□ -1.93
VBP1-204ENST00000625964 PCDHGB4Q9UN71 923 aa3□□□□□ -1.93
VBP1-204ENST00000625964 MRPS28Q9Y2Q9 187 aaKnown RBP3□□□□□ -1.93
VBP1-204ENST00000625964 ASTN2O75129 1339 aaPredicted RBP3□□□□□ -1.93
VBP1-204ENST00000625964 IGKV3D-15A0A087WSY6 115 aa2.99□□□□□ -1.93
VBP1-204ENST00000625964 HYKKA2RU49 373 aa2.99□□□□□ -1.93
VBP1-204ENST00000625964 A8MV72 311 aaPredicted RBP2.99□□□□□ -1.93
VBP1-204ENST00000625964 E9PI62 339 aa2.99□□□□□ -1.93
VBP1-204ENST00000625964 EML2O95834 649 aa2.99□□□□□ -1.93
VBP1-204ENST00000625964 BCL10O95999 233 aa2.99□□□□□ -1.93
VBP1-204ENST00000625964 HMBSP08397 361 aa2.99□□□□□ -1.93
VBP1-204ENST00000625964 ZNF883P0CG24 379 aa2.99□□□□□ -1.93
VBP1-204ENST00000625964 CEACAM1P13688 526 aa2.99□□□□□ -1.93
VBP1-204ENST00000625964 PORP16435 677 aaPredicted RBP2.99□□□□□ -1.93
VBP1-204ENST00000625964 TRIM21P19474 475 aaKnown RBP2.99□□□□□ -1.93
VBP1-204ENST00000625964 STAT2P52630 851 aa2.99□□□□□ -1.93
VBP1-204ENST00000625964 EIF5P55010 431 aaKnown RBP2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms