RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 ULBP3Q9BZM4 244 aa17.48■□□□□ 0.39
SCAMP4-213ENST00000621748 TCAF1Q9Y4C2 921 aa17.48■□□□□ 0.39
SCAMP4-213ENST00000621748 BSNQ9UPA5 3926 aa17.48■□□□□ 0.39
SCAMP4-213ENST00000621748 BOD1L1Q8NFC6 3051 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 TLCD2A6NGC4 264 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 GSTM1P09488 218 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 CD151P48509 253 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 KPNA2P52292 529 aaKnown RBP17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 GSTM4Q03013 218 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 ABHD18Q0P651 414 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 RPA4Q13156 261 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 TBR1Q16650 682 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 FBXO38Q6PIJ6 1188 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 CCDC137Q6PK04 289 aaKnown RBP17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 AFTPHQ6ULP2 937 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 PACS1Q6VY07 963 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 NAPRTQ6XQN6 538 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 RASGRP3Q8IV61 690 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 PRELID2Q8N945 189 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 SIDT2Q8NBJ9 832 aaKnown RBP17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 ACVR1CQ8NER5 493 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 OR6P1Q8NGX9 317 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 OR4L1Q8NH43 312 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 MED8Q96G25 268 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 CD180Q99467 661 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 TRIT1Q9H3H1 467 aaKnown RBP17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 GPN2Q9H9Y4 310 aaPredicted RBP17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 EIF2B3Q9NR50 452 aaKnown RBP17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 CHRAC1Q9NRG0 131 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 IL17BQ9UHF5 180 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 ZNF462Q96JM2 2506 aa17.47■□□□□ 0.39
SCAMP4-213ENST00000621748 UBA6A0AVT1 1052 aaPredicted RBP17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 IFRD1O00458 451 aaPredicted RBP17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 SPAG6O75602 509 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 KIAA0754O94854 1291 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 TIAF1O95411 115 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 EBLN1P0CF75 366 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 POLR2CP19387 275 aaPredicted RBP17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 COILP38432 576 aaPredicted RBP17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 FNTAP49354 379 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 SESN2P58004 480 aaPredicted RBP17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 CRADDP78560 199 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 BASP1P80723 227 aaKnown RBP17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 MAP7Q14244 749 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 SEMA3AQ14563 771 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 BRD3Q15059 726 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 PPP1R7Q15435 360 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 NLRP9Q7RTR0 991 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 PPP1R3BQ86XI6 285 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 KMT5CQ86Y97 462 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 KLHL7Q8IXQ5 586 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 ESX1Q8N693 406 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 CEP112Q8N8E3 955 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 GALNT6Q8NCL4 622 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 LCN9Q8WX39 176 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 ELMO1Q92556 727 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 TFGQ92734 400 aaPredicted RBP17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 SLC45A3Q96JT2 553 aa17.46■□□□□ 0.39
SCAMP4-213ENST00000621748 BTN3A3O00478 584 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 LIN7AO14910 233 aaPredicted RBP17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 NKX2-8O15522 239 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 FTH1P02794 183 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 F8A1P23610 371 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 STAT5AP42229 794 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 HSD11B2P80365 405 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 PRKG2Q13237 762 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 TUBB3Q13509 450 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 BOP1Q14137 746 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 PCID2Q5JVF3 399 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 LYPLAL1Q5VWZ2 237 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 ARMC6Q6NXE6 501 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 ZNF449Q6P9G9 518 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 C6orf15Q6UXA7 325 aaPredicted RBP17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 LDB1Q86U70 411 aaPredicted RBP17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 D2HGDHQ8N465 521 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 PPHLN1Q8NEY8 458 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 OR52E1Q8NGJ3 308 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 KIAA1143Q96AT1 154 aaPredicted RBP17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 SGSM3Q96HU1 749 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 SRMSQ9H3Y6 488 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 TFB2MQ9H5Q4 396 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 MVB12BQ9H7P6 319 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 PDE7BQ9NP56 450 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 RPS6KL1Q9Y6S9 549 aa17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 GCN1Q92616 2671 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 HELZ2Q9BYK8 2649 aaKnown RBP17.45■□□□□ 0.38
SCAMP4-213ENST00000621748 TCRBV7S3A2A0A539 114 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 SLC5A10A0PJK1 596 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 CTAGE15A4D2H0 777 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 ZNF891A8MT65 544 aaPredicted RBP17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 QSOX1O00391 747 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 BTN3A1O00481 513 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 OR56A5P0C7T3 313 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 FAM87AP0C7U9 286 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 CTAGE8P0CG41 777 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 ACADLP28330 430 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 ARL4DP49703 201 aa17.44■□□□□ 0.38
SCAMP4-213ENST00000621748 PRAMEP78395 509 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms