RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 TMEM9Q9P0T7 183 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 MTRF1LQ9UGC7 380 aaKnown RBP13.96□□□□□ -0.17
CBWD3-217ENST00000621474 CLCA2Q9UQC9 943 aa13.96□□□□□ -0.17
CBWD3-217ENST00000621474 ANKRD12Q6UB98 2062 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 CEP295Q9C0D2 2601 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 APOA4P06727 396 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 TPBGLP0DKB5 382 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 HOXB3P14651 431 aaPredicted RBP13.95□□□□□ -0.18
CBWD3-217ENST00000621474 CHRM3P20309 590 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 CDKN2DP55273 166 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 GPLD1P80108 840 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 SHC2P98077 582 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 BIRC2Q13490 618 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 CAMK2BQ13554 666 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 SPIDRQ14159 915 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 EFTUD2Q15029 972 aaKnown RBP eCLIP13.95□□□□□ -0.18
CBWD3-217ENST00000621474 KBTBD12Q3ZCT8 623 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 PLEKHS1Q5SXH7 462 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 STRA8Q7Z7C7 330 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 SLC26A11Q86WA9 606 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 SLITRK4Q8IW52 837 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 RBM12BQ8IXT5 1001 aaKnown RBP13.95□□□□□ -0.18
CBWD3-217ENST00000621474 GSPT2Q8IYD1 628 aaKnown RBP13.95□□□□□ -0.18
CBWD3-217ENST00000621474 CACTIN-AS1Q8N1I8 211 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 OR5AR1Q8NGP9 310 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 WDR48Q8TAF3 677 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 FBF1Q8TES7 1133 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 RSC1A1Q92681 617 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 SH3KBP1Q96B97 665 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 GFM1Q96RP9 751 aaKnown RBP13.95□□□□□ -0.18
CBWD3-217ENST00000621474 GPR21Q99679 349 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.95□□□□□ -0.18
CBWD3-217ENST00000621474 SLC24A2Q9UI40 661 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 RUVBL2Q9Y230 463 aaKnown RBP13.95□□□□□ -0.18
CBWD3-217ENST00000621474 COMMD10Q9Y6G5 202 aa13.95□□□□□ -0.18
CBWD3-217ENST00000621474 ADAMTS20P59510 1910 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 E5RI56 91 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 IFRD1O00458 451 aaPredicted RBP13.94□□□□□ -0.18
CBWD3-217ENST00000621474 KPNA5O15131 536 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 CPNE6O95741 557 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 FAM153BP0C7A2 387 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 TARDBPQ13148 414 aaKnown RBP eCLIP13.94□□□□□ -0.18
CBWD3-217ENST00000621474 ISXQ2M1V0 245 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 FAM153CQ494X1 144 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 ACSBG2Q5FVE4 666 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 RBM44Q6ZP01 1051 aaKnown RBP13.94□□□□□ -0.18
CBWD3-217ENST00000621474 USP53Q70EK8 1073 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 PIM3Q86V86 326 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 GALNT15Q8N3T1 639 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 ZBTB2Q8N680 514 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 OR5K2Q8NHB8 316 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 GABPB2Q8TAK5 448 aaPredicted RBP13.94□□□□□ -0.18
CBWD3-217ENST00000621474 ATXN7L3BQ96GX2 97 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 OLFM1Q99784 485 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 FUT8Q9BYC5 575 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 SYNDIG1Q9H7V2 258 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 DHRS7Q9Y394 339 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 ENTPD2Q9Y5L3 495 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 NFS1Q9Y697 457 aa13.94□□□□□ -0.18
CBWD3-217ENST00000621474 A0A1W2PNU3 283 aaPredicted RBP13.93□□□□□ -0.18
CBWD3-217ENST00000621474 UBXN7O94888 489 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 SLU7O95391 586 aaKnown RBP13.93□□□□□ -0.18
CBWD3-217ENST00000621474 CD9P21926 228 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 ZFP36L1Q07352 338 aaKnown RBP13.93□□□□□ -0.18
CBWD3-217ENST00000621474 GRB7Q14451 532 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 CCNI2Q6ZMN8 369 aaPredicted RBP13.93□□□□□ -0.18
CBWD3-217ENST00000621474 ZFPM2Q8WW38 1151 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 MENTQ9BUN1 341 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 TXLNGYQ9BZA5 131 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 TSPYL1Q9H0U9 437 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 CCDC68Q9H2F9 335 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 SEMA6CQ9H3T2 930 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 KLHL42Q9P2K6 505 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 ASF1AQ9Y294 204 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 HEBP2Q9Y5Z4 205 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 DUX1O43812 170 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 CSO75390 466 aaKnown RBP13.93□□□□□ -0.18
CBWD3-217ENST00000621474 SPAG6O75602 509 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 FAM155BO75949 473 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 MATN4O95460 622 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 JUPP14923 745 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 TYRP1P17643 537 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 FDXRP22570 491 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 TNFRSF8P28908 595 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 ATP5DP30049 168 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 STX2P32856 288 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 CAPZBP47756 277 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 PPP1CAP62136 330 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 PRKG2Q13237 762 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 TMED2Q15363 201 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 KLHL38Q2WGJ6 581 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 HECTD2Q5U5R9 776 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 CYHR1Q6ZMK1 362 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 RASGRP3Q8IV61 690 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 TBC1D21Q8IYX1 336 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 EIF1ADQ8N9N8 165 aaKnown RBP13.93□□□□□ -0.18
CBWD3-217ENST00000621474 OR52E1Q8NGJ3 308 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 OR10G6Q8NH81 332 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 FERD3LQ96RJ6 166 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 HGH1Q9BTY7 390 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms