RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 PPM1NQ8N819 430 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 EIF1ADQ8N9N8 165 aaKnown RBP18.12■□□□□ 0.49
CIRBP-245ENST00000621399 ZFPM2Q8WW38 1151 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 INPP5DQ92835 1189 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 GPR21Q99679 349 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 MVB12BQ9H7P6 319 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 ANKZF1Q9H8Y5 726 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 TAS2R13Q9NYV9 303 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 KLHL42Q9P2K6 505 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 ATXN7L1Q9ULK2 861 aaPredicted RBP18.12■□□□□ 0.49
CIRBP-245ENST00000621399 CLCA2Q9UQC9 943 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 SPTBN2O15020 2390 aa18.12■□□□□ 0.49
CIRBP-245ENST00000621399 ZFC3H1O60293 1989 aaKnown RBP18.11■□□□□ 0.49
CIRBP-245ENST00000621399 TCEA3O75764 348 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 ACSL3O95573 720 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 TOP3BO95985 862 aaKnown RBP18.11■□□□□ 0.49
CIRBP-245ENST00000621399 C1QAP02745 245 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 FAM153BP0C7A2 387 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 SKIV2L2P42285 1042 aaKnown RBP18.11■□□□□ 0.49
CIRBP-245ENST00000621399 CDKN2DP55273 166 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 PLCL1Q15111 1095 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 FAM153CQ494X1 144 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 MAP9Q49MG5 647 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 ACSBG2Q5FVE4 666 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 HECTD2Q5U5R9 776 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 CDCP2Q5VXM1 449 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 TMPRSS7Q7RTY8 843 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 ZC3HC1Q86WB0 502 aaKnown RBP18.11■□□□□ 0.49
CIRBP-245ENST00000621399 GSPT2Q8IYD1 628 aaKnown RBP18.11■□□□□ 0.49
CIRBP-245ENST00000621399 CFAP61Q8NHU2 1237 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 GIMAP7Q8NHV1 300 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 JPH3Q8WXH2 748 aaPredicted RBP18.11■□□□□ 0.49
CIRBP-245ENST00000621399 UBXN4Q92575 508 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 SLC30A3Q99726 388 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 CPNE1Q99829 537 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 ZMYND15Q9H091 742 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 TRIT1Q9H3H1 467 aaKnown RBP18.11■□□□□ 0.49
CIRBP-245ENST00000621399 KIR3DX1Q9H7L2 352 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 RDH14Q9HBH5 336 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 SLC24A2Q9UI40 661 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 TRMT6Q9UJA5 497 aaKnown RBP18.11■□□□□ 0.49
CIRBP-245ENST00000621399 TSR3Q9UJK0 312 aaKnown RBP18.11■□□□□ 0.49
CIRBP-245ENST00000621399 VWA7Q9Y334 891 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 DHRS7Q9Y394 339 aa18.11■□□□□ 0.49
CIRBP-245ENST00000621399 FAM149AA5PLN7 773 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 DUX1O43812 170 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 UBXN7O94888 489 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 CPNE6O95741 557 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 TYRP1P17643 537 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 AMD1P17707 334 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 SAT1P21673 171 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 TNFRSF8P28908 595 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 ATP5DP30049 168 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 ILF2Q12905 390 aaKnown RBP18.1■□□□□ 0.49
CIRBP-245ENST00000621399 PRKG2Q13237 762 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 GBX1Q14549 363 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 UBAP2Q5T6F2 1119 aaKnown RBP18.1■□□□□ 0.49
CIRBP-245ENST00000621399 FAM45BPQ6NSW5 357 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 PIM3Q86V86 326 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 TBC1D21Q8IYX1 336 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 ACVR1CQ8NER5 493 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 OR5AR1Q8NGP9 310 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 FAM45AQ8TCE6 357 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 CD200R1Q8TD46 325 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 NCSTNQ92542 709 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 ELMO2Q96JJ3 720 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 DEPDC7Q96QD5 511 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 CYTH2Q99418 400 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 HGH1Q9BTY7 390 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 RHOJQ9H4E5 214 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 EPB41L1Q9H4G0 881 aa18.1■□□□□ 0.49
CIRBP-245ENST00000621399 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.1■□□□□ 0.49
CIRBP-245ENST00000621399 V9GYY5 206 aaPredicted RBP18.1■□□□□ 0.49
CIRBP-245ENST00000621399 MED19A0JLT2 244 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-245ENST00000621399 D6RAR5 112 aa18.09■□□□□ 0.49
CIRBP-245ENST00000621399 RPN2P04844 631 aa18.09■□□□□ 0.49
CIRBP-245ENST00000621399 PROS1P07225 676 aa18.09■□□□□ 0.49
CIRBP-245ENST00000621399 MCM3P25205 808 aa18.09■□□□□ 0.49
CIRBP-245ENST00000621399 GP5P40197 560 aa18.09■□□□□ 0.49
CIRBP-245ENST00000621399 TIAL1Q01085 375 aaKnown RBP eCLIP18.09■□□□□ 0.49
CIRBP-245ENST00000621399 TARDBPQ13148 414 aaKnown RBP eCLIP18.09■□□□□ 0.49
CIRBP-245ENST00000621399 SQSTM1Q13501 440 aa18.09■□□□□ 0.49
CIRBP-245ENST00000621399 NAB1Q13506 487 aa18.09■□□□□ 0.49
CIRBP-245ENST00000621399 EFTUD2Q15029 972 aaKnown RBP eCLIP18.09■□□□□ 0.494e-26■■□□□ 13.4
CIRBP-245ENST00000621399 CLPPQ16740 277 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-245ENST00000621399 GRTP1Q5TC63 336 aa18.09■□□□□ 0.49
CIRBP-245ENST00000621399 UNC5DQ6UXZ4 953 aa18.09■□□□□ 0.49
CIRBP-245ENST00000621399 CCNI2Q6ZMN8 369 aaPredicted RBP18.09■□□□□ 0.49
CIRBP-245ENST00000621399 TRMT10CQ7L0Y3 403 aaKnown RBP18.09■□□□□ 0.49
CIRBP-245ENST00000621399 CPNE9Q8IYJ1 553 aa18.09■□□□□ 0.49
CIRBP-245ENST00000621399 DCBLD1Q8N8Z6 715 aa18.09■□□□□ 0.49
CIRBP-245ENST00000621399 OR5K2Q8NHB8 316 aa18.09■□□□□ 0.49
CIRBP-245ENST00000621399 FOPNLQ96NB1 174 aa18.09■□□□□ 0.49
CIRBP-245ENST00000621399 NUDT22Q9BRQ3 303 aa18.09■□□□□ 0.49
CIRBP-245ENST00000621399 POLG2Q9UHN1 485 aa18.09■□□□□ 0.49
CIRBP-245ENST00000621399 TDRKHQ9Y2W6 561 aaKnown RBP18.09■□□□□ 0.49
CIRBP-245ENST00000621399 ASXL3Q9C0F0 2248 aa18.08■□□□□ 0.49
CIRBP-245ENST00000621399 SPEGQ15772 3267 aa18.08■□□□□ 0.49
CIRBP-245ENST00000621399 TPRP12270 2363 aaKnown RBP18.08■□□□□ 0.48
CIRBP-245ENST00000621399 FAM95CA0A1B0GW59 222 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms