RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 PIGKQ92643 395 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 MTMR8Q96EF0 704 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF558Q96NG5 402 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 POPDC2Q9HBU9 364 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 WASF3Q9UPY6 502 aa7.08□□□□□ -1.28
COLCA1-205ENST00000620864 PAPSS1O43252 624 aaPredicted RBP7.07□□□□□ -1.28
COLCA1-205ENST00000620864 PRPS2P11908 318 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 CYP4B1P13584 511 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 DCDC5Q6ZRR9 648 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 SATL1Q86VE3 508 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 TSEN2Q8NCE0 465 aaKnown RBP7.07□□□□□ -1.28
COLCA1-205ENST00000620864 TMEM161BQ8NDZ6 487 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 CIB1Q99828 191 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 ITPAQ9BY32 194 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 WASF2Q9Y6W5 498 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 A0A1W2PQ67 120 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 RAB19A4D1S5 217 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 SAGP10523 405 aaPredicted RBP7.07□□□□□ -1.28
COLCA1-205ENST00000620864 LHCGRP22888 699 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 MANFP55145 182 aaKnown RBP7.07□□□□□ -1.28
COLCA1-205ENST00000620864 CYP4F8P98187 520 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 XKR6Q5GH73 641 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 FBXO47Q5MNV8 452 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 TPRG1LQ5T0D9 272 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 FBXL19Q6PCT2 694 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 KLHL35Q6PF15 583 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 GALNTL5Q7Z4T8 443 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 FAM131BQ86XD5 332 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 SEMA4DQ92854 862 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 RAD51AP1Q96B01 352 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 DMRTB1Q96MA1 342 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 OSMRQ99650 979 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 ZSCAN5AQ9BUG6 496 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 SAP130Q9H0E3 1048 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 FAM124BQ9H5Z6 455 aaPredicted RBP7.07□□□□□ -1.28
COLCA1-205ENST00000620864 MRPL17Q9NRX2 175 aaKnown RBP7.07□□□□□ -1.28
COLCA1-205ENST00000620864 SPG21Q9NZD8 308 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 LMTK2Q8IWU2 1503 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 TSPAN3O60637 253 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 PEX11AO75192 247 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 CYP3A4P08684 503 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 IL7P13232 177 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 CD247P20963 164 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 PTPN6P29350 595 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 RTP1P59025 263 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 E2F1Q01094 437 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 FBXO46Q6PJ61 603 aaPredicted RBP7.07□□□□□ -1.28
COLCA1-205ENST00000620864 ZPBP2Q6X784 338 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF227Q86WZ6 799 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 FAM84AQ96KN4 292 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 USB1Q9BQ65 265 aaKnown RBP7.07□□□□□ -1.28
COLCA1-205ENST00000620864 LYARQ9NX58 379 aaKnown RBP7.07□□□□□ -1.28
COLCA1-205ENST00000620864 GABBR2O75899 941 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 BPNT1O95861 308 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 IL3P08700 152 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 TUBP50607 506 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 NRLP54845 237 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 PRMT2P55345 433 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 PRKCZQ05513 592 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 FIP1L1Q6UN15 594 aaKnown RBP7.07□□□□□ -1.28
COLCA1-205ENST00000620864 CYP4V2Q6ZWL3 525 aaPredicted RBP7.07□□□□□ -1.28
COLCA1-205ENST00000620864 BRSK2Q8IWQ3 736 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 MCEMP1Q8IX19 187 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 CBR4Q8N4T8 237 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 SLA2Q9H6Q3 261 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 ATP13A1Q9HD20 1204 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 ABCC13Q9NSE7 274 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 TTC34A8MYJ7 566 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 PER2O15055 1255 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 POLR1CO15160 346 aaPredicted RBP7.07□□□□□ -1.28
COLCA1-205ENST00000620864 PDYNP01213 254 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 LAMP2P13473 410 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 CD79BP40259 229 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 SNRPD1P62314 119 aaKnown RBP7.07□□□□□ -1.28
COLCA1-205ENST00000620864 PRR5P85299 388 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 CDK18Q07002 472 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 FOXM1Q08050 763 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 PPP3CAQ08209 521 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 GIT2Q14161 759 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 IDNKQ5T6J7 187 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 GJB7Q6PEY0 223 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 C4orf19Q8IY42 314 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 GPR65Q8IYL9 337 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 FUCA2Q9BTY2 467 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 SLC27A6Q9Y2P4 619 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 NARSO43776 548 aaKnown RBP7.07□□□□□ -1.28
COLCA1-205ENST00000620864 DNAJB6O75190 326 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 AGR2O95994 175 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 TRBC1P01850 177 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 C7P10643 843 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 PTPRAP18433 802 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 GRIA2P42262 883 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 CLCN3P51790 818 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 RAPSNQ13702 412 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 PTGR1Q14914 329 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 ADGRD2Q7Z7M1 963 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 WDSUB1Q8N9V3 476 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 CD300LFQ8TDQ1 290 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF606Q8WXB4 792 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 NCSTNQ92542 709 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms