RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 HIF1AQ16665 826 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 IFI16Q16666 785 aaKnown RBP4.41□□□□□ -1.7
SNCA-213ENST00000618500 ATG9BQ674R7 924 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 CERS6Q6ZMG9 384 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 TRIM11Q96F44 468 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 CELF6Q96J87 481 aaKnown RBP4.41□□□□□ -1.7
SNCA-213ENST00000618500 CALR3Q96L12 384 aaKnown RBP4.41□□□□□ -1.7
SNCA-213ENST00000618500 SPSB2Q99619 263 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 TUBGCP2Q9BSJ2 902 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 MLPHQ9BV36 600 aaPredicted RBP4.41□□□□□ -1.7
SNCA-213ENST00000618500 TGIF2Q9GZN2 237 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 NDST4Q9H3R1 872 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 ZBTB20Q9HC78 741 aaPredicted RBP4.41□□□□□ -1.7
SNCA-213ENST00000618500 SEPT11Q9NVA2 429 aaKnown RBP4.41□□□□□ -1.7
SNCA-213ENST00000618500 PARVAQ9NVD7 372 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 BEX4Q9NWD9 120 aaPredicted RBP4.41□□□□□ -1.7
SNCA-213ENST00000618500 HRASLS2Q9NWW9 162 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 CWC15Q9P013 229 aaKnown RBP4.41□□□□□ -1.7
SNCA-213ENST00000618500 IFT80Q9P2H3 777 aaPredicted RBP4.41□□□□□ -1.7
SNCA-213ENST00000618500 ST6GALNAC2Q9UJ37 374 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 TMPRSS11EQ9UL52 423 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 PLCL2Q9UPR0 1127 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 ZNF711Q9Y462 761 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 ANK2Q01484 3957 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 KNL1Q8NG31 2342 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 C1orf232A0A0U1RR37 186 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 A0A1B0GX78 115 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 GOLGA6CA6NDK9 693 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 GOLGA6BA6NDN3 693 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 AGAP14A8MT82 685 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 PDZK1P1A8MUH7 402 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 PRPF4O43172 522 aaKnown RBP eCLIP4.41□□□□□ -1.7
SNCA-213ENST00000618500 PHF2O75151 1096 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 SLC25A14O95258 325 aaPredicted RBP4.41□□□□□ -1.7
SNCA-213ENST00000618500 PDHA1P08559 390 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 GOLGA6DP0CG33 693 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 MYBL1P10243 752 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 CTPS1P17812 591 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 HLA-DPA1P20036 260 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 HNRNPH3P31942 346 aaKnown RBP4.41□□□□□ -1.7
SNCA-213ENST00000618500 ARL4AP40617 200 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 PREPP48147 710 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 IST1P53990 364 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 BOP1Q14137 746 aaKnown RBP4.41□□□□□ -1.7
SNCA-213ENST00000618500 NAA25Q14CX7 972 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 NKAIN1Q4KMZ8 207 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 BOLA3Q53S33 107 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 ACAD10Q6JQN1 1059 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 SPESP1Q6UW49 350 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 NDUFAF7Q7L592 441 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 MCOLN2Q8IZK6 566 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 LRRC75A-AS1Q8N1F1 130 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 GPR26Q8NDV2 337 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 MDS2Q8NDY4 140 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 HM13Q8TCT9 377 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 NTNG2Q96CW9 530 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 MAGED4Q96JG8 741 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 RMDN2Q96LZ7 410 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 PIP5K1AQ99755 562 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 C11orf70Q9BRQ4 267 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 VPS16Q9H269 839 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 ZFYVE1Q9HBF4 777 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 C14orf105Q9NVL8 296 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 GOLGA6AQ9NYA3 693 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 HACD3Q9P035 362 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 C2CD3Q4AC94 2353 aa4.41□□□□□ -1.7
SNCA-213ENST00000618500 TRGV8A0A0C4DH27 118 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 A0A0J9YY10 115 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 OR6C74A6NCV1 312 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 TMEM191CA6NGB0 347 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 ADAM10O14672 748 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 ZSCAN9O15535 394 aaPredicted RBP4.4□□□□□ -1.7
SNCA-213ENST00000618500 ATP1A1P05023 1023 aaKnown RBP4.4□□□□□ -1.7
SNCA-213ENST00000618500 CBSLP0DN79 551 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 ICAM2P13598 275 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 EEF1GP26641 437 aaKnown RBP4.4□□□□□ -1.7
SNCA-213ENST00000618500 CBSP35520 551 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 SPAM1P38567 509 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 ZNF165P49910 485 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 OGDHQ02218 1023 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 TMEM115Q12893 351 aaPredicted RBP4.4□□□□□ -1.7
SNCA-213ENST00000618500 ITGA9Q13797 1035 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 IHHQ14623 411 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 C3AR1Q16581 482 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 CA9Q16790 459 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 PRMT9Q6P2P2 845 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 KIRREL2Q6UWL6 708 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 PAMR1Q6UXH9 720 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 PCGF5Q86SE9 256 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 SPPL2CQ8IUH8 684 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 CHERPQ8IWX8 916 aaKnown RBP4.4□□□□□ -1.7
SNCA-213ENST00000618500 ARMC10Q8N2F6 343 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 PSMF1Q92530 271 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 ULK4Q96C45 1275 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 TMEM121Q9BTD3 319 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 SPATA16Q9BXB7 569 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 SLC22A11Q9NSA0 550 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 SOHLH2Q9NX45 425 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 STMN3Q9NZ72 180 aa4.4□□□□□ -1.7
SNCA-213ENST00000618500 ZDHHC9Q9Y397 364 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms