RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 OR6P1Q8NGX9 317 aa24.52■■□□□ 1.52
VEGFA-228ENST00000617771 OR4L1Q8NH43 312 aa24.52■■□□□ 1.52
VEGFA-228ENST00000617771 STARD8Q92502 1023 aa24.52■■□□□ 1.52
VEGFA-228ENST00000617771 ELMO1Q92556 727 aa24.52■■□□□ 1.52
VEGFA-228ENST00000617771 TFGQ92734 400 aaPredicted RBP24.52■■□□□ 1.52
VEGFA-228ENST00000617771 RNF31Q96EP0 1072 aa24.52■■□□□ 1.52
VEGFA-228ENST00000617771 TFB2MQ9H5Q4 396 aaKnown RBP24.52■■□□□ 1.52
VEGFA-228ENST00000617771 EIF2B3Q9NR50 452 aaKnown RBP24.52■■□□□ 1.52
VEGFA-228ENST00000617771 FGF21Q9NSA1 209 aa24.52■■□□□ 1.52
VEGFA-228ENST00000617771 SLC2A6Q9UGQ3 507 aa24.52■■□□□ 1.52
VEGFA-228ENST00000617771 IL17BQ9UHF5 180 aa24.52■■□□□ 1.52
VEGFA-228ENST00000617771 PRSS21Q9Y6M0 314 aa24.52■■□□□ 1.52
VEGFA-228ENST00000617771 NKX2-8O15522 239 aa24.51■■□□□ 1.51
VEGFA-228ENST00000617771 CEP104O60308 925 aa24.51■■□□□ 1.51
VEGFA-228ENST00000617771 PLOD1Q02809 727 aaPredicted RBP24.51■■□□□ 1.51
VEGFA-228ENST00000617771 CDC20Q12834 499 aa24.51■■□□□ 1.51
VEGFA-228ENST00000617771 FASTKD1Q53R41 847 aaKnown RBP24.51■■□□□ 1.51
VEGFA-228ENST00000617771 OR52E1Q8NGJ3 308 aa24.51■■□□□ 1.51
VEGFA-228ENST00000617771 HOMER3Q9NSC5 361 aa24.51■■□□□ 1.51
VEGFA-228ENST00000617771 SOHLH2Q9NX45 425 aa24.51■■□□□ 1.51
VEGFA-228ENST00000617771 CROTQ9UKG9 612 aa24.51■■□□□ 1.51
VEGFA-228ENST00000617771 POMT2Q9UKY4 750 aa24.51■■□□□ 1.51
VEGFA-228ENST00000617771 PPP2R2CQ9Y2T4 447 aa24.51■■□□□ 1.51
VEGFA-228ENST00000617771 GSAPA4D1B5 854 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 AP3B1O00203 1094 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 PRKAR1AP10644 381 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 TCN2P20062 427 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 CDH3P22223 829 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 TUBB4BP68371 445 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 BASP1P80723 227 aaKnown RBP24.5■■□□□ 1.51
VEGFA-228ENST00000617771 TUBB2AQ13885 445 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 BOP1Q14137 746 aaKnown RBP24.5■■□□□ 1.51
VEGFA-228ENST00000617771 SYTL3Q4VX76 610 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 CRTC2Q53ET0 693 aaPredicted RBP24.5■■□□□ 1.51
VEGFA-228ENST00000617771 PWWP2BQ6NUJ5 590 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 PHC3Q8NDX5 983 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 OR8K5Q8NH50 307 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 SGSM3Q96HU1 749 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 ZNF778Q96MU6 729 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 HGH1Q9BTY7 390 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 TUBB2BQ9BVA1 445 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 ADNPQ9H2P0 1102 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 C1GALT1Q9NS00 363 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 GEMIN8Q9NWZ8 242 aaKnown RBP24.5■■□□□ 1.51
VEGFA-228ENST00000617771 PADI1Q9ULC6 663 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 BTRCQ9Y297 605 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 PCDHB3Q9Y5E6 796 aa24.5■■□□□ 1.51
VEGFA-228ENST00000617771 TIAF1O95411 115 aa24.49■■□□□ 1.51
VEGFA-228ENST00000617771 CCR10P46092 362 aa24.49■■□□□ 1.51
VEGFA-228ENST00000617771 NFATC3Q12968 1075 aa24.49■■□□□ 1.51
VEGFA-228ENST00000617771 AARS2Q5JTZ9 985 aaKnown RBP24.49■■□□□ 1.51
VEGFA-228ENST00000617771 PCID2Q5JVF3 399 aa24.49■■□□□ 1.51
VEGFA-228ENST00000617771 AMIGO1Q86WK6 493 aa24.49■■□□□ 1.51
VEGFA-228ENST00000617771 TSSK1BQ9BXA7 367 aa24.49■■□□□ 1.51
VEGFA-228ENST00000617771 FANCEQ9HB96 536 aa24.49■■□□□ 1.51
VEGFA-228ENST00000617771 ANAPC5Q9UJX4 755 aa24.49■■□□□ 1.51
VEGFA-228ENST00000617771 KCND3Q9UK17 655 aa24.49■■□□□ 1.51
VEGFA-228ENST00000617771 MAP3K7O43318 606 aa24.48■■□□□ 1.51
VEGFA-228ENST00000617771 OR1I1O60431 355 aa24.48■■□□□ 1.51
VEGFA-228ENST00000617771 CXCR5P32302 372 aa24.48■■□□□ 1.51
VEGFA-228ENST00000617771 SESN2P58004 480 aaPredicted RBP24.48■■□□□ 1.51
VEGFA-228ENST00000617771 PRKG2Q13237 762 aa24.48■■□□□ 1.51
VEGFA-228ENST00000617771 BRD3Q15059 726 aa24.48■■□□□ 1.51
VEGFA-228ENST00000617771 ZNF534Q76KX8 674 aa24.48■■□□□ 1.51
VEGFA-228ENST00000617771 FAM117AQ9C073 453 aa24.48■■□□□ 1.51
VEGFA-228ENST00000617771 IL22Q9GZX6 179 aa24.48■■□□□ 1.51
VEGFA-228ENST00000617771 LHX9Q9NQ69 397 aa24.48■■□□□ 1.51
VEGFA-228ENST00000617771 KCND1Q9NSA2 647 aa24.48■■□□□ 1.51
VEGFA-228ENST00000617771 STARD5Q9NSY2 213 aa24.48■■□□□ 1.51
VEGFA-228ENST00000617771 ASF1AQ9Y294 204 aa24.48■■□□□ 1.51
VEGFA-228ENST00000617771 MRPS18BQ9Y676 258 aaKnown RBP24.48■■□□□ 1.51
VEGFA-228ENST00000617771 BAHCC1Q9P281 2608 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 SLC9B1P1A6NJY1 282 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 C2orf74A8MZ97 194 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 BTN3A3O00478 584 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 BTN3A1O00481 513 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 ITGB6P18564 788 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 F8A1P23610 371 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 PRDX3P30048 256 aaKnown RBP24.47■■□□□ 1.51
VEGFA-228ENST00000617771 KCNJ1P48048 391 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 POLE2P56282 527 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 GPR19Q15760 415 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 C16orf46Q6P387 395 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 FBXO38Q6PIJ6 1188 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 ZNF501Q96CX3 271 aaPredicted RBP24.47■■□□□ 1.51
VEGFA-228ENST00000617771 PPM1MQ96MI6 270 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 CHRAC1Q9NRG0 131 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 CATSPERZQ9NTU4 200 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 BFARQ9NZS9 450 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 POLG2Q9UHN1 485 aa24.47■■□□□ 1.51
VEGFA-228ENST00000617771 HEMK1Q9Y5R4 338 aaPredicted RBP24.47■■□□□ 1.51
VEGFA-228ENST00000617771 FASNP49327 2511 aaKnown RBP24.47■■□□□ 1.51
VEGFA-228ENST00000617771 SLC5A10A0PJK1 596 aa24.46■■□□□ 1.51
VEGFA-228ENST00000617771 CPNE3O75131 537 aaKnown RBP24.46■■□□□ 1.51
VEGFA-228ENST00000617771 ACADLP28330 430 aa24.46■■□□□ 1.51
VEGFA-228ENST00000617771 OAS2P29728 719 aaKnown RBP24.46■■□□□ 1.51
VEGFA-228ENST00000617771 NPY2RP49146 381 aa24.46■■□□□ 1.51
VEGFA-228ENST00000617771 TMEM126BQ8IUX1 230 aa24.46■■□□□ 1.51
VEGFA-228ENST00000617771 TBC1D21Q8IYX1 336 aa24.46■■□□□ 1.51
VEGFA-228ENST00000617771 OR5AR1Q8NGP9 310 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms