RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 MAPK12P53778 367 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 RGS1Q08116 209 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 ZNF423Q2M1K9 1284 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 BRSK1Q8TDC3 778 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 ESAMQ96AP7 390 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 AURKBQ96GD4 344 aaPredicted RBP10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 NIFKQ9BYG3 293 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 POLR2J3Q9H1A7 115 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 ZIM2Q9NZV7 527 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 ABCG2Q9UNQ0 655 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 RUVBL1Q9Y265 456 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 SH3PXD2BA1X283 911 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 A8MT66 165 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 SLC25A12O75746 678 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 SLC35G4P0C7Q5 338 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 ZNF806P0C7X5 589 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 MYCLP1P12525 358 aaPredicted RBP10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 GRIA1P42261 906 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 PTGER3P43115 390 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 CRYBB1P53674 252 aaPredicted RBP10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 LARS2Q15031 903 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 HSDL1Q3SXM5 330 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 IDNKQ5T6J7 187 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 OR2T5Q6IEZ7 315 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 PDE12Q6L8Q7 609 aaKnown RBP10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 GLIS1Q8NBF1 620 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 OR2T29Q8NH02 315 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 TUBA1CQ9BQE3 449 aa10.5□□□□□ -0.73
CLTCL1-209ENST00000617103 CNTNAP1P78357 1384 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 PLOD2O00469 737 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 CD247P20963 164 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 GLDCP23378 1020 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 PRKCHP24723 683 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 IL1R2P27930 398 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 ACSL1P33121 698 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 MAGEA8P43361 318 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 MBLAC2Q68D91 279 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 TREML1Q86YW5 311 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 RAVER1Q8IY67 606 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 ADGRG2Q8IZP9 1017 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 CFAP52Q8N1V2 620 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 HNRNPABQ99729 332 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 TMEM27Q9HBJ8 222 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 SPON1Q9HCB6 807 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 SIRPGQ9P1W8 387 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 PCDHA2Q9Y5H9 948 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 SPATA31A6Q5VVP1 1343 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 SPAM1P38567 509 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 ZNF132P52740 706 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 MRPS6P82932 125 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 MPP2Q14168 576 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 DSC3Q14574 896 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 TSC22D1Q15714 1073 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 MSS51Q4VC12 460 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 FBXL20Q96IG2 436 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 CHIAQ9BZP6 476 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 SLC6A15Q9H2J7 730 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 CCDC177Q9NQR7 707 aaPredicted RBP10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 TMLHEQ9NVH6 421 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 PCDHGA4Q9Y5G9 962 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 A0A1W2PQH9 124 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 GTPBP1O00178 669 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 ACSL4O60488 711 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 KDM4BO94953 1096 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 CLCN2P51788 898 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 VBP1P61758 197 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 SMARCB1Q12824 385 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 SPATS1Q496A3 300 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 CMPK2Q5EBM0 449 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 FCRL5Q96RD9 977 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 RPF2Q9H7B2 306 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 MRPL17Q9NRX2 175 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 THG1LQ9NWX6 298 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 ZNF282Q9UDV7 671 aaPredicted RBP10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 H3BM21 787 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 PITPNM1O00562 1244 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 PER2O15055 1255 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 ZNF432O94892 652 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 LDOC1O95751 146 aaPredicted RBP10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 PRKAR2AP13861 404 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 DNAJB1P25685 340 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 GPD2P43304 727 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 NRLP54845 237 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 CSTF1Q05048 431 aaKnown RBP10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 ZNF311Q5JNZ3 666 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 SH3PXD2AQ5TCZ1 1133 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 MED27Q6P2C8 311 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 DNAJB7Q7Z6W7 309 aaPredicted RBP10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 SLC43A3Q8NBI5 491 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 KAT2AQ92830 837 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 LPPQ93052 612 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 ZUFSPQ96AP4 578 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 FRMD6Q96NE9 622 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 PHOX2BQ99453 314 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 SLC30A2Q9BRI3 323 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 FBXO10Q9UK96 956 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 SLC27A5Q9Y2P5 690 aa10.49□□□□□ -0.73
CLTCL1-209ENST00000617103 FBP2O00757 339 aa10.48□□□□□ -0.73
CLTCL1-209ENST00000617103 C22orf31O95567 290 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms