RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 FRS2Q8WU20 508 aa15.31■□□□□ 0.04
GPN1-212ENST00000616939 CDKN2AIPNLQ96HQ2 116 aa15.31■□□□□ 0.04
GPN1-212ENST00000616939 KLHL5Q96PQ7 755 aa15.31■□□□□ 0.04
GPN1-212ENST00000616939 ZYG11BQ9C0D3 744 aa15.31■□□□□ 0.04
GPN1-212ENST00000616939 ACOT13Q9NPJ3 140 aa15.31■□□□□ 0.04
GPN1-212ENST00000616939 POLR3HQ9Y535 204 aaPredicted RBP15.31■□□□□ 0.04
GPN1-212ENST00000616939 MICAL3Q7RTP6 2002 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 TRIP12Q14669 1992 aaPredicted RBP15.3■□□□□ 0.04
GPN1-212ENST00000616939 CHD5Q8TDI0 1954 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 IGLV3-10A0A075B6K4 115 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 OR2A25A4D2G3 310 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 PABPN1LA6NDY0 278 aaKnown RBP15.3■□□□□ 0.04
GPN1-212ENST00000616939 H0Y626 953 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 BTN3A1O00481 513 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 ASNA1O43681 348 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 VPS26AO75436 327 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 CREG1O75629 220 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 TRIM16O95361 564 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 F2P00734 622 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 ODC1P11926 461 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 SMPD1P17405 629 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 MAP2K4P45985 399 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 HK3P52790 923 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 NCS1P62166 190 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 CSNK2BP67870 215 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 IFITM2Q01629 132 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 ANKRD34AQ69YU3 496 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 ALG1LQ6GMV1 187 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 PAGE2Q7Z2X7 111 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 GPSM1Q86YR5 675 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 MSRB3Q8IXL7 192 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 CDYL2Q8N8U2 506 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 OR13C4Q8NGS5 318 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 OR10A6Q8NH74 314 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 LGALS12Q96DT0 336 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 ZNF486Q96H40 463 aaPredicted RBP15.3■□□□□ 0.04
GPN1-212ENST00000616939 SLC39A13Q96H72 371 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 GPR21Q99679 349 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 APOL4Q9BPW4 351 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 ELP3Q9H9T3 547 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 NPAP1Q9NZP6 1156 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 GALPQ9UBC7 116 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 EIF2B4Q9UI10 523 aaKnown RBP15.3■□□□□ 0.04
GPN1-212ENST00000616939 ARL5AQ9Y689 179 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 COMMD10Q9Y6G5 202 aa15.3■□□□□ 0.04
GPN1-212ENST00000616939 E9PQ18 207 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 ENPP3O14638 875 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 SNPHO15079 494 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 CA12O43570 354 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 SNAI1O95863 264 aaPredicted RBP15.29■□□□□ 0.04
GPN1-212ENST00000616939 HAPLN1P10915 354 aaPredicted RBP15.29■□□□□ 0.04
GPN1-212ENST00000616939 PSMB9P28065 219 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 DGKQP52824 942 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 LAPTM5Q13571 262 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 NR6A1Q15406 480 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 ZNF404Q494X3 552 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 PNCKQ6P2M8 343 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 LRRC8DQ7L1W4 858 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 SCD5Q86SK9 330 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 SLC7A5P1Q8MH63 180 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 BLOC1S5Q8TDH9 187 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 SLC38A4Q969I6 547 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 PDLIM5Q96HC4 596 aaKnown RBP15.29■□□□□ 0.04
GPN1-212ENST00000616939 CEP295NLQ96MC4 621 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 PITX2Q99697 317 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 POLR1EQ9GZS1 481 aaKnown RBP15.29■□□□□ 0.04
GPN1-212ENST00000616939 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.29■□□□□ 0.04
GPN1-212ENST00000616939 TNPO3Q9Y5L0 923 aaKnown RBP15.29■□□□□ 0.04
GPN1-212ENST00000616939 TIMM13Q9Y5L4 95 aaPredicted RBP15.29■□□□□ 0.04
GPN1-212ENST00000616939 UBA6A0AVT1 1052 aaPredicted RBP15.29■□□□□ 0.04
GPN1-212ENST00000616939 ILVBLA1L0T0 632 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 AGAP5A6NIR3 686 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 IL6P05231 212 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 PAX3P23760 479 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 FMO4P31512 558 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 CASP3P42574 277 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 CLK3P49761 638 aaKnown RBP15.29■□□□□ 0.04
GPN1-212ENST00000616939 HTR6P50406 440 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 GZMMP51124 257 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 ZNF45Q02386 682 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 PRKCDQ05655 676 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 SF3B4Q15427 424 aaKnown RBP eCLIP15.29■□□□□ 0.04
GPN1-212ENST00000616939 CPZQ66K79 652 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 KDM4DQ6B0I6 523 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 LETMD1Q6P1Q0 360 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 METTL23Q86XA0 190 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 DNAJB3Q8WWF6 145 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 ATL1Q8WXF7 558 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 ZHX1-C8orf76Q96EF9 292 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 PYURFQ96I23 114 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 ZFP42Q96MM3 310 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 SIAEQ9HAT2 523 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 C1orf109Q9NX04 203 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 CCDC59Q9P031 241 aaKnown RBP15.29■□□□□ 0.04
GPN1-212ENST00000616939 OPTCQ9UBM4 332 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 VPS51Q9UID3 782 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 TRMT6Q9UJA5 497 aaKnown RBP15.29■□□□□ 0.04
GPN1-212ENST00000616939 UTS2RQ9UKP6 389 aa15.29■□□□□ 0.04
GPN1-212ENST00000616939 EIF3LQ9Y262 564 aaKnown RBP15.29■□□□□ 0.04
GPN1-212ENST00000616939 TLR6Q9Y2C9 796 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms