RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 F3P13726 295 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 IVDP26440 423 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 HSD17B3P37058 310 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 ITGA1P56199 1179 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 RPS15P62841 145 aaKnown RBP17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 CDK16Q00536 496 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 PRPSAP1Q14558 356 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 KIR2DS5Q14953 304 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 KRTAP21-3Q3LHN1 58 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 PLEKHN1Q494U1 663 aaPredicted RBP17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 HPS6Q86YV9 775 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 IQCKQ8N0W5 287 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 SCAMP4Q969E2 229 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 HDAC11Q96DB2 347 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 COX14Q96I36 57 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 OLFM3Q96PB7 478 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 AGAP2Q99490 1192 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 RAB6BQ9NRW1 208 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 SLC30A1Q9Y6M5 507 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 CROCCQ5TZA2 2017 aa17.22■□□□□ 0.35
TRAPPC3-209ENST00000616395 A0A1W2PQ67 120 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 A6NL46 340 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 AP3B1O00203 1094 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 PSMD3O43242 534 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 SOCS5O75159 536 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 UBXN7O94888 489 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 ACP5P13686 325 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 SLC2A4P14672 509 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 PHBP35232 272 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 UBE2IP63279 158 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 GALNT2Q10471 571 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 SLC10A2Q12908 348 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 ELOAQ14241 798 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 RFTN1Q14699 578 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 PRKD1Q15139 912 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 HIF1AQ16665 826 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 DNAJC21Q5F1R6 531 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 RNASEH2BQ5TBB1 312 aaKnown RBP17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 SP5Q6BEB4 398 aaPredicted RBP17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 PWWP2BQ6NUJ5 590 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 RELL1Q8IUW5 271 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 SCRN2Q96FV2 425 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 SPATA13Q96N96 652 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 PSKH2Q96QS6 385 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 PHTF1Q9UMS5 762 aa17.21■□□□□ 0.35
TRAPPC3-209ENST00000616395 RRP9O43818 475 aaKnown RBP17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 MYZAPP0CAP1 466 aa17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 ZSCAN5DPP0CG00 497 aa17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 AMD1P17707 334 aa17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 CTPS1P17812 591 aa17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 CCNCP24863 283 aa17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 RENBPP51606 427 aa17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 CDK18Q07002 472 aa17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 PPIDQ08752 370 aaKnown RBP17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 B4GALNT4Q76KP1 1039 aa17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 PRSS42Q7Z5A4 293 aa17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 KLHL6Q8WZ60 621 aa17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 ZNF599Q96NL3 588 aa17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 PLEKHG4BQ96PX9 1271 aa17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 NT5MQ9NPB1 228 aa17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 KLHL8Q9P2G9 620 aaPredicted RBP17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 G3BP2Q9UN86 482 aaKnown RBP17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 FARSAQ9Y285 508 aaKnown RBP17.21■□□□□ 0.34
TRAPPC3-209ENST00000616395 OR5K4A6NMS3 321 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 SASH3O75995 380 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 ETS1P14921 441 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 LPOP22079 712 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 ATP5DP30049 168 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 MMP13P45452 471 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 GDF10P55107 478 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 TRAF2Q12933 501 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 PARP6Q2NL67 630 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 CACHD1Q5VU97 1274 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 FAM92BQ6ZTR7 304 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 TMEM26Q6ZUK4 368 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 CNPY4Q8N129 248 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 AVL9Q8NBF6 648 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 TSGA13Q96PP4 275 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 MCCC1Q96RQ3 725 aaPredicted RBP17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 UCK1Q9HA47 277 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 PPCSQ9HAB8 311 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 NOD2Q9HC29 1040 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 XAB2Q9HCS7 855 aaKnown RBP17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 PDE7BQ9NP56 450 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 GPR83Q9NYM4 423 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 VPS18Q9P253 973 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 TTLL3Q9Y4R7 772 aa17.2■□□□□ 0.34
TRAPPC3-209ENST00000616395 HIVEP1P15822 2718 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 ZFHX3Q15911 3703 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 ERI2A8K979 691 aaKnown RBP17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 TMEM63AO94886 807 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 NUDT17P0C025 328 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 NELFEP18615 380 aaKnown RBP17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 TPSB2P20231 275 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 TUBB3Q13509 450 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 TPSAB1Q15661 275 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 ZXDCQ2QGD7 858 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 ANKRD20A2Q5SQ80 823 aa17.19■□□□□ 0.34
TRAPPC3-209ENST00000616395 ANKRD20A1Q5TYW2 823 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms