RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 ADGRG6Q86SQ4 1221 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 BEND7Q8N7W2 519 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 TRPC4APQ8TEL6 797 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 ZNF483Q8TF39 744 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 SKA2Q8WVK7 121 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 ASB11Q8WXH4 323 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 PPM1EQ8WY54 764 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 FAM3CQ92520 227 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 HIC2Q96JB3 615 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 ZNF514Q96K75 400 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 NSUN5Q96P11 429 aaKnown RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 INSM2Q96T92 566 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 CCDC28BQ9BUN5 200 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 SLC12A9Q9BXP2 914 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 TRIM54Q9BYV2 358 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 OR2AG1Q9H205 316 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 PARVBQ9HBI1 364 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 MID1IP1Q9NPA3 183 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 PTBP2Q9UKA9 531 aaKnown RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 PCTPQ9UKL6 214 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 GPR34Q9UPC5 381 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 TRIM33Q9UPN9 1127 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 CDYLQ9Y232 598 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 SHISA7A6NL88 538 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 TMEM233B4DJY2 109 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 GFYI3L273 518 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 E2F3O00716 465 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 MAN2B1O00754 1011 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 AZIN1O14977 448 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 HNRNPCL1O60812 293 aaKnown RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 DNAJC8O75937 253 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 FSBPO95073 299 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 GUCA1CO95843 209 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 ANXA5P08758 320 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 HIST1H2AGP0C0S8 130 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 T-ENOLP0DO92 83 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 TSPAN8P19075 237 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 HIST1H2ADP20671 130 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 TEAD1P28347 426 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 MAPK9P45984 424 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 AGTR2P50052 363 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 NCALDP61601 193 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 CDKL1Q00532 357 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 SRSF11Q05519 484 aaKnown RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 SGCGQ13326 291 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 CCINQ13939 588 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 PDCD2Q16342 344 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 WSCD2Q2TBF2 565 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 TTC31Q49AM3 519 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 SYTL3Q4VX76 610 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 FBXO48Q5FWF7 155 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 KIAA1161Q6NSJ0 714 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 TTC23LQ6PF05 361 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 USP30Q70CQ3 517 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 UBE2R2Q712K3 238 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 TRIM74Q86UV6 250 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 KBTBD6Q86V97 674 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 VRK3Q8IV63 474 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 PLA2G15Q8NCC3 412 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 OR56A4Q8NGH8 313 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 OR14C36Q8NHC7 312 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 RPLP0P6Q8NHW5 317 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 AGAP11Q8TF27 550 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 DLG3Q92796 817 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 TMEM159Q96B96 161 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 RHBDF1Q96CC6 855 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 SIPA1Q96FS4 1042 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 COX14Q96I36 57 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 NSL1Q96IY1 281 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 MAELQ96JY0 434 aaKnown RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 HIST1H2AHQ96KK5 128 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 LINC00615Q96LM1 132 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 LENG8Q96PV6 779 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 HIST1H2AJQ99878 128 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 EGFL8Q99944 293 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 H2AFJQ9BTM1 129 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 HGH1Q9BTY7 390 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 CCDC106Q9BWC9 280 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 WDR55Q9H6Y2 383 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 MEAF6Q9HAF1 191 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 TNFRSF12AQ9NP84 129 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 SEMA4BQ9NPR2 832 aaPredicted RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 ARMCX1Q9P291 453 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 ATXN10Q9UBB4 475 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 FZD4Q9ULV1 537 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 ZFR2Q9UPR6 939 aaKnown RBP8.73□□□□□ -1.01
CCDC47-207ENST00000612558 NCKAP1Q9Y2A7 1128 aa8.73□□□□□ -1.01
CCDC47-207ENST00000612558 DOCK9Q9BZ29 2069 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 GOLGA8QA0A0J9YX86 632 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 C17orf113A0A1B0GUU1 675 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 SLC5A10A0PJK1 596 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 GOLGA8OA6NCC3 632 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 PABPN1LA6NDY0 278 aaKnown RBP8.72□□□□□ -1.01
CCDC47-207ENST00000612558 CAPN14A8MX76 684 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 GOLGA8NF8WBI6 632 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 PPP6CO00743 305 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 GIPC1O14908 333 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 LIN7AO14910 233 aaPredicted RBP8.72□□□□□ -1.01
CCDC47-207ENST00000612558 TAPBPO15533 448 aa8.72□□□□□ -1.01
CCDC47-207ENST00000612558 LILRB5O75023 590 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms