RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 FNDC5Q8NAU1 212 aa14.45□□□□□ -0.1
CDH1-213ENST00000612417 OR52B6Q8NGF0 335 aa14.45□□□□□ -0.1
CDH1-213ENST00000612417 C1orf50Q9BV19 199 aa14.45□□□□□ -0.1
CDH1-213ENST00000612417 C2orf49Q9BVC5 232 aaPredicted RBP14.45□□□□□ -0.1
CDH1-213ENST00000612417 TRIM8Q9BZR9 551 aa14.45□□□□□ -0.1
CDH1-213ENST00000612417 IL17CQ9P0M4 197 aa14.45□□□□□ -0.1
CDH1-213ENST00000612417 KIAA1522Q9P206 1035 aaPredicted RBP14.45□□□□□ -0.1
CDH1-213ENST00000612417 MRPS23Q9Y3D9 190 aaKnown RBP14.45□□□□□ -0.1
CDH1-213ENST00000612417 PCDHB1Q9Y5F3 818 aa14.45□□□□□ -0.1
CDH1-213ENST00000612417 OR51B4Q9Y5P0 310 aa14.45□□□□□ -0.1
CDH1-213ENST00000612417 RNF103-CHMP3A0A140T963 221 aa14.44□□□□□ -0.1
CDH1-213ENST00000612417 IFRD1O00458 451 aaPredicted RBP14.44□□□□□ -0.1
CDH1-213ENST00000612417 ZNF197O14709 1029 aa14.44□□□□□ -0.1
CDH1-213ENST00000612417 FZD6O60353 706 aa14.44□□□□□ -0.1
CDH1-213ENST00000612417 TPST1O60507 370 aa14.44□□□□□ -0.1
CDH1-213ENST00000612417 NRIP1P48552 1158 aa14.44□□□□□ -0.1
CDH1-213ENST00000612417 RHOAP61586 193 aa14.44□□□□□ -0.1
CDH1-213ENST00000612417 CACNG1Q06432 222 aa14.44□□□□□ -0.1
CDH1-213ENST00000612417 LMAN2Q12907 356 aa14.44□□□□□ -0.1
CDH1-213ENST00000612417 CBX2Q14781 532 aaPredicted RBP14.44□□□□□ -0.1
CDH1-213ENST00000612417 INO80DQ53TQ3 878 aaPredicted RBP14.44□□□□□ -0.1
CDH1-213ENST00000612417 SCIMPQ6UWF3 145 aa14.44□□□□□ -0.1
CDH1-213ENST00000612417 ZSWIM3Q96MP5 696 aa14.44□□□□□ -0.1
CDH1-213ENST00000612417 INTS7Q9NVH2 962 aaKnown RBP14.44□□□□□ -0.1
CDH1-213ENST00000612417 SLAMF8Q9P0V8 285 aa14.44□□□□□ -0.1
CDH1-213ENST00000612417 LHX3Q9UBR4 397 aa14.44□□□□□ -0.1
CDH1-213ENST00000612417 BLOC1S6Q9UL45 172 aa14.44□□□□□ -0.1
CDH1-213ENST00000612417 CLEC4EQ9ULY5 219 aa14.44□□□□□ -0.1
CDH1-213ENST00000612417 ZNF232Q9UNY5 417 aa14.44□□□□□ -0.1
CDH1-213ENST00000612417 FCF1Q9Y324 198 aaKnown RBP14.44□□□□□ -0.1
CDH1-213ENST00000612417 GOLGA8CPA6NN73 597 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 ZNF701M0R085 212 aaPredicted RBP14.43□□□□□ -0.1
CDH1-213ENST00000612417 PRMT5O14744 637 aaPredicted RBP14.43□□□□□ -0.1
CDH1-213ENST00000612417 PRAMEF12O95522 483 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 CEBPBP17676 345 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 HRH2P25021 359 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 PRSS36Q5K4E3 855 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 RETSATQ6NUM9 610 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 TTC33Q6PID6 262 aaPredicted RBP14.43□□□□□ -0.1
CDH1-213ENST00000612417 SBSNQ6UWP8 590 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 TMC5Q6UXY8 1006 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 DLEU7Q6UYE1 221 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 DNAJC14Q6Y2X3 702 aaPredicted RBP14.43□□□□□ -0.1
CDH1-213ENST00000612417 CERS6Q6ZMG9 384 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 IFNEQ86WN2 208 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 SFRP1Q8N474 314 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 DCAF4L2Q8NA75 395 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 PDPRQ8NCN5 879 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 FIBINQ8TAL6 211 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 OSCP1Q8WVF1 389 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 SMG7Q92540 1137 aaKnown RBP14.43□□□□□ -0.1
CDH1-213ENST00000612417 ESAMQ96AP7 390 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 TMIGD2Q96BF3 282 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 ZNF707Q96C28 371 aaPredicted RBP14.43□□□□□ -0.1
CDH1-213ENST00000612417 ALG14Q96F25 216 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 TMEM74Q96NL1 305 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 C19orf43Q9BQ61 176 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 NKX2-4Q9H2Z4 354 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 OCEL1Q9H607 264 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 RPF2Q9H7B2 306 aaKnown RBP14.43□□□□□ -0.1
CDH1-213ENST00000612417 BPIFA1Q9NP55 256 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 DDX18Q9NVP1 670 aaKnown RBP14.43□□□□□ -0.1
CDH1-213ENST00000612417 SMPD3Q9NY59 655 aaPredicted RBP14.43□□□□□ -0.1
CDH1-213ENST00000612417 MAGEL2Q9UJ55 1249 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 PKP3Q9Y446 797 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 PCDHB3Q9Y5E6 796 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 EI24O14681 340 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 ANKRD28O15084 1053 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 LSM1O15116 133 aaKnown RBP14.43□□□□□ -0.1
CDH1-213ENST00000612417 CD70P32970 193 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 HMGCLP35914 325 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 PPP2R2DQ66LE6 453 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 LPCAT2Q7L5N7 544 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 GOLGA7Q7Z5G4 137 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 TMEM25Q86YD3 366 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 ACTL8Q9H568 366 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 MAGEE1Q9HCI5 957 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 MSRAQ9UJ68 235 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 ZNF711Q9Y462 761 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 PIKFYVEQ9Y2I7 2098 aa14.43□□□□□ -0.1
CDH1-213ENST00000612417 NEDD8-MDP1E9PL57 170 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 K7ERQ8 282 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 OR7A17O14581 309 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 LDLRP01130 860 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 CAPN1P07384 714 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 NCK1P16333 377 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 RPS3P23396 243 aaKnown RBP eCLIP14.42□□□□□ -0.1
CDH1-213ENST00000612417 JAK1P23458 1154 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 CAPGP40121 348 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 FUT11Q495W5 492 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 CYBRD1Q53TN4 286 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 ATXN7L2Q5T6C5 722 aaPredicted RBP14.42□□□□□ -0.1
CDH1-213ENST00000612417 RNF165Q6ZSG1 346 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 FRA10AC1Q70Z53 315 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 TAS2R42Q7RTR8 314 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 ZNF786Q8N393 782 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 METTL6Q8TCB7 284 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 BPIFB1Q8TDL5 484 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 BIRC7Q96CA5 298 aa14.42□□□□□ -0.1
CDH1-213ENST00000612417 CDK15Q96Q40 435 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms