RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 NOMO1Q15155 1222 aa15.34■□□□□ 0.05
HDDC2-210ENST00000609574 SLC1A5Q15758 541 aa15.34■□□□□ 0.05
HDDC2-210ENST00000609574 DCAF10Q5QP82 559 aa15.34■□□□□ 0.05
HDDC2-210ENST00000609574 SARM1Q6SZW1 724 aa15.34■□□□□ 0.05
HDDC2-210ENST00000609574 MRGPREQ86SM8 312 aa15.34■□□□□ 0.05
HDDC2-210ENST00000609574 IPMKQ8NFU5 416 aa15.34■□□□□ 0.05
HDDC2-210ENST00000609574 HM13Q8TCT9 377 aa15.34■□□□□ 0.05
HDDC2-210ENST00000609574 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.34■□□□□ 0.05
HDDC2-210ENST00000609574 RNF25Q96BH1 459 aaPredicted RBP15.34■□□□□ 0.05
HDDC2-210ENST00000609574 ULK4Q96C45 1275 aa15.34■□□□□ 0.05
HDDC2-210ENST00000609574 LINC00615Q96LM1 132 aaPredicted RBP15.34■□□□□ 0.05
HDDC2-210ENST00000609574 PPM1MQ96MI6 270 aa15.34■□□□□ 0.05
HDDC2-210ENST00000609574 VAT1Q99536 393 aa15.34■□□□□ 0.05
HDDC2-210ENST00000609574 FERMT1Q9BQL6 677 aa15.34■□□□□ 0.05
HDDC2-210ENST00000609574 VPS37BQ9H9H4 285 aa15.34■□□□□ 0.05
HDDC2-210ENST00000609574 IFT80Q9P2H3 777 aaPredicted RBP15.34■□□□□ 0.05
HDDC2-210ENST00000609574 CRLS1Q9UJA2 301 aa15.34■□□□□ 0.05
HDDC2-210ENST00000609574 CCDC66A2RUB6 948 aa15.33■□□□□ 0.04
HDDC2-210ENST00000609574 HNRNPRO43390 633 aaKnown RBP15.33■□□□□ 0.04
HDDC2-210ENST00000609574 TNNT1P13805 278 aa15.33■□□□□ 0.04
HDDC2-210ENST00000609574 NFKB1P19838 968 aa15.33■□□□□ 0.04
HDDC2-210ENST00000609574 LMAN1P49257 510 aa15.33■□□□□ 0.04
HDDC2-210ENST00000609574 DCDP81605 110 aaKnown RBP15.33■□□□□ 0.04
HDDC2-210ENST00000609574 BCL7AQ4VC05 210 aa15.33■□□□□ 0.04
HDDC2-210ENST00000609574 FAM182AQ5T1J6 154 aa15.33■□□□□ 0.04
HDDC2-210ENST00000609574 KDELC1Q6UW63 502 aa15.33■□□□□ 0.04
HDDC2-210ENST00000609574 COG1Q8WTW3 980 aa15.33■□□□□ 0.04
HDDC2-210ENST00000609574 PTERQ96BW5 349 aa15.33■□□□□ 0.04
HDDC2-210ENST00000609574 FCRL5Q96RD9 977 aa15.33■□□□□ 0.04
HDDC2-210ENST00000609574 AP1M1Q9BXS5 423 aa15.33■□□□□ 0.04
HDDC2-210ENST00000609574 MVB12BQ9H7P6 319 aa15.33■□□□□ 0.04
HDDC2-210ENST00000609574 TXLNGQ9NUQ3 528 aa15.33■□□□□ 0.04
HDDC2-210ENST00000609574 ZNHIT6Q9NWK9 470 aaKnown RBP15.33■□□□□ 0.04
HDDC2-210ENST00000609574 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.33■□□□□ 0.047e-10■□□□□ 9.6
HDDC2-210ENST00000609574 SHANK1Q9Y566 2161 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 C17orf113A0A1B0GUU1 675 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 OR2B3O76000 313 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 SRP72O76094 671 aaKnown RBP15.32■□□□□ 0.04
HDDC2-210ENST00000609574 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 ST6GAL1P15907 406 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 CHRNA4P43681 627 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 FANCCQ00597 558 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 LRRC38Q5VT99 294 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 AMIGO1Q86WK6 493 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 ST6GALNAC3Q8NDV1 305 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 SLC35G2Q8TBE7 412 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 PROKR1Q8TCW9 393 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 UBE2Q2Q8WVN8 375 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 P3H4Q92791 437 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 LRRC45Q96CN5 670 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 MRGPRX2Q96LB1 330 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 RMDN2Q96LZ7 410 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 TRAPPC9Q96Q05 1148 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 TFB2MQ9H5Q4 396 aaKnown RBP15.32■□□□□ 0.04
HDDC2-210ENST00000609574 P4HTMQ9NXG6 502 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 TRHDEQ9UKU6 1024 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 MED13Q9UHV7 2174 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 HIVEP3Q5T1R4 2406 aa15.32■□□□□ 0.04
HDDC2-210ENST00000609574 C5orf60A6NFR6 353 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 C3orf70A6NLC5 250 aaPredicted RBP15.31■□□□□ 0.04
HDDC2-210ENST00000609574 GPR39O43194 453 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 ANXA9O76027 345 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 CRTAMO95727 393 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 TMEM253P0C7T8 217 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 ITGA3P26006 1051 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 CD68P34810 354 aaPredicted RBP15.31■□□□□ 0.04
HDDC2-210ENST00000609574 SLC1A1P43005 524 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 CD151P48509 253 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 PRKD1Q15139 912 aaPredicted RBP15.31■□□□□ 0.04
HDDC2-210ENST00000609574 LLGL1Q15334 1064 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 TAF1AQ15573 450 aaPredicted RBP15.31■□□□□ 0.04
HDDC2-210ENST00000609574 SLC18A3Q16572 532 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 C1orf189Q5VU69 101 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 C1QL3Q5VWW1 255 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 DAAM2Q86T65 1068 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 VPS50Q96JG6 964 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 GBP5Q96PP8 586 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 COPS8Q99627 209 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 PITPNM3Q9BZ71 974 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 KLHL25Q9H0H3 589 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 ACTR10Q9NZ32 417 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 RSPH14Q9UHP6 348 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 SRPK3Q9UPE1 567 aa15.31■□□□□ 0.04
HDDC2-210ENST00000609574 CELSR2Q9HCU4 2923 aa15.3■□□□□ 0.04
HDDC2-210ENST00000609574 GOLGA6L19H0YKK7 550 aa15.3■□□□□ 0.04
HDDC2-210ENST00000609574 BTN3A3O00478 584 aa15.3■□□□□ 0.04
HDDC2-210ENST00000609574 BTN3A1O00481 513 aa15.3■□□□□ 0.04
HDDC2-210ENST00000609574 LRRTM2O43300 516 aa15.3■□□□□ 0.04
HDDC2-210ENST00000609574 AKR1B10O60218 316 aa15.3■□□□□ 0.04
HDDC2-210ENST00000609574 KDM1AO60341 852 aa15.3■□□□□ 0.04
HDDC2-210ENST00000609574 KLF7O75840 302 aaPredicted RBP15.3■□□□□ 0.04
HDDC2-210ENST00000609574 TPM3P06753 285 aa15.3■□□□□ 0.04
HDDC2-210ENST00000609574 PIM1P11309 404 aaPredicted RBP15.3■□□□□ 0.04
HDDC2-210ENST00000609574 ATP1B2P14415 290 aaPredicted RBP15.3■□□□□ 0.04
HDDC2-210ENST00000609574 ITGALP20701 1170 aa15.3■□□□□ 0.04
HDDC2-210ENST00000609574 GEMP55040 296 aa15.3■□□□□ 0.04
HDDC2-210ENST00000609574 WASHC5Q12768 1159 aa15.3■□□□□ 0.04
HDDC2-210ENST00000609574 AIMP2Q13155 320 aaKnown RBP15.3■□□□□ 0.04
HDDC2-210ENST00000609574 PRPSAP1Q14558 356 aa15.3■□□□□ 0.04
HDDC2-210ENST00000609574 ZNF789Q5FWF6 425 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms