RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 MRPL19P49406 292 aaKnown RBP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 NEK2P51955 445 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 PTSQ03393 145 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 GTDC1Q4AE62 458 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SPANXN4Q5MJ08 99 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 INTS11Q5TA45 600 aaKnown RBP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 RGL4Q8IZJ4 473 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ZDHHC6Q9H6R6 413 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SPG21Q9NZD8 308 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 TMCO1Q9UM00 188 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ATP11BQ9Y2G3 1177 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SLC4A7Q9Y6M7 1214 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 IGSF6O95976 241 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 UGT2B4P06133 528 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SERPINA4P29622 427 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SLC5A2P31639 672 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CCR7P32248 378 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 COL4A6Q14031 1691 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 PLCL1Q15111 1095 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ATP6AP1Q15904 470 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SUSD1Q6UWL2 747 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 LIX1Q8N485 282 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 DPP10Q8N608 796 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 OR10A6Q8NH74 314 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SLC22A17Q8WUG5 538 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 FIG4Q92562 907 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ULK4Q96C45 1275 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 NSMCE2Q96MF7 247 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 BEGAINQ9BUH8 593 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 THUMPD3Q9BV44 507 aaKnown RBP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SLC46A2Q9BY10 475 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 VCX3AQ9NNX9 186 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SLC6A13Q9NSD5 602 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 KIAA1522Q9P206 1035 aaPredicted RBP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 HEMK1Q9Y5R4 338 aaPredicted RBP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CEPT1Q9Y6K0 416 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 XIRP2A4UGR9 3374 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 KANSL1LA0AUZ9 987 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 LATS1O95835 1130 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 GNRH1P01148 92 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ITGB8P26012 769 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 HTR1EP28566 365 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 PPP1R8Q12972 351 aaKnown RBP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 KIAA0040Q15053 153 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ZIK1Q3SY52 487 aaPredicted RBP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ASTLQ6HA08 431 aaPredicted RBP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 TTC33Q6PID6 262 aaPredicted RBP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 MACC1Q6ZN28 852 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 DPY19L3Q6ZPD9 716 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CHST15Q7LFX5 561 aaPredicted RBP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 TMEM25Q86YD3 366 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 VRK3Q8IV63 474 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 MFSD2AQ8NA29 543 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ZNF689Q96CS4 500 aaPredicted RBP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ZNF583Q96ND8 569 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CORO1BQ9BR76 489 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 HTATIP2Q9BUP3 242 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 C9orf16Q9BUW7 83 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 OCEL1Q9H607 264 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CARS2Q9HA77 564 aaKnown RBP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 PAK6Q9NQU5 681 aaPredicted RBP11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 HCFC1R1Q9NWW0 138 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ARL15Q9NXU5 204 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 UTS2RQ9UKP6 389 aa11.56□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 K7EPI3 171 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 RASAL1O95294 804 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 LDLRP01130 860 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ACRP10323 421 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 EPB42P16452 691 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CDH2P19022 906 aaPredicted RBP11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 RPIAP49247 311 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 IST1P53990 364 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CRY1Q16526 586 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 IMPG1Q17R60 797 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 IRAK1BP1Q5VVH5 260 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 GRAMD4Q6IC98 578 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 HTR3DQ70Z44 454 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ANKRD33Q7Z3H0 272 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 ITIH5Q86UX2 942 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 FAM217AQ8IXS0 508 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 PHACTR4Q8IZ21 702 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CHST14Q8NCH0 376 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 FIBINQ8TAL6 211 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SLC13A3Q8WWT9 602 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 AURKBQ96GD4 344 aaPredicted RBP11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 HERC2P3Q9BVR0 1158 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CFHR5Q9BXR6 569 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CLK4Q9HAZ1 481 aaKnown RBP11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 LEFTY2O00292 366 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SOCS5O75159 536 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 STK16O75716 305 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 EPORP19235 508 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CCR2P41597 374 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 YAP1P46937 504 aaKnown RBP11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SLC36A3Q495N2 470 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 AASDHQ4L235 1098 aaPredicted RBP11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 MPPE1Q53F39 396 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 SULT1C3Q6IMI6 304 aa11.55□□□□□ -0.56
HMGN3-AS1-201ENST00000604516 CNKSR3Q6P9H4 555 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms