RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 RMDN2Q96LZ7 410 aa11.39□□□□□ -0.59
PDLIM1P1-201ENST00000604187 XPO4Q9C0E2 1151 aaKnown RBP11.39□□□□□ -0.59
PDLIM1P1-201ENST00000604187 SRMSQ9H3Y6 488 aa11.39□□□□□ -0.59
PDLIM1P1-201ENST00000604187 EPS8L2Q9H6S3 715 aa11.39□□□□□ -0.59
PDLIM1P1-201ENST00000604187 UGT1A7Q9HAW7 530 aa11.39□□□□□ -0.59
PDLIM1P1-201ENST00000604187 UGT1A10Q9HAW8 530 aa11.39□□□□□ -0.59
PDLIM1P1-201ENST00000604187 UGT1A8Q9HAW9 530 aa11.39□□□□□ -0.59
PDLIM1P1-201ENST00000604187 CBX8Q9HC52 389 aa11.39□□□□□ -0.59
PDLIM1P1-201ENST00000604187 SLC6A20Q9NP91 592 aa11.39□□□□□ -0.59
PDLIM1P1-201ENST00000604187 FANCLQ9NW38 375 aa11.39□□□□□ -0.59
PDLIM1P1-201ENST00000604187 CCDC78A2IDD5 438 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 MGAT4DA6NG13 374 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 BTN3A3O00478 584 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 BTN3A1O00481 513 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 DDX3XO00571 662 aaKnown RBP eCLIP11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 PCDH17O14917 1159 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 GZMAP12544 262 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 NDUFS1P28331 727 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 AKT1P31749 480 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ARSEP51690 589 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 DCDP81605 110 aaKnown RBP11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 PRKD1Q15139 912 aaPredicted RBP11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ASIC2Q16515 512 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 LONRF2Q1L5Z9 754 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 DEFB110Q30KQ9 67 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 CT47A1Q5JQC4 288 aaPredicted RBP11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 RHBDD2Q6NTF9 364 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 MRPL14Q6P1L8 145 aaKnown RBP11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 PQLC3Q8N755 202 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 NIPA2Q8N8Q9 360 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ACVR1CQ8NER5 493 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 FAM71BQ8TC56 605 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 PROKR1Q8TCW9 393 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 HDAC11Q96DB2 347 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ZNF830Q96NB3 372 aaPredicted RBP11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 AGAP3Q96P47 875 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ERGIC2Q96RQ1 377 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 NRTNQ99748 197 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 HAUS4Q9H6D7 363 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 DHCR7Q9UBM7 475 aaKnown RBP11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 CDC23Q9UJX2 597 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ACSL5Q9ULC5 683 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 DNMT3AQ9Y6K1 912 aaPredicted RBP11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 AP1M2Q9Y6Q5 423 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 COLEC10Q9Y6Z7 277 aa11.38□□□□□ -0.59
PDLIM1P1-201ENST00000604187 PKDREJQ9NTG1 2253 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 GLYATL1P3A0A0U1RQE8 302 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 LRRC53A6NM62 1247 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 CCL21O00585 134 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ZSCAN9O15535 394 aaPredicted RBP11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 PRICKLE3O43900 615 aaPredicted RBP11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 NDST3O95803 873 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 POLBP06746 335 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 CD63P08962 238 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 SSTR2P30874 369 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 HMGCLP35914 325 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 SPAM1P38567 509 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 TDGF1P3P51864 188 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 SLC10A2Q12908 348 aaPredicted RBP11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 NOMO1Q15155 1222 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 NKAIN1Q4KMZ8 207 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 E4F1Q66K89 784 aaPredicted RBP11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 CCDC70Q6NSX1 233 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 GFRALQ6UXV0 394 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 RPTNQ6XPR3 784 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 LINC00696Q6ZRV3 163 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 TRIM73Q86UV7 250 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 NT5DC3Q86UY8 548 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 LILRA3Q8N6C8 439 aaPredicted RBP11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 CATSPER1Q8NEC5 780 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ANKRD20A12PQ8NF67 263 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 OR2L2Q8NH16 312 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 SPATA22Q8NHS9 363 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ZNF670Q9BS34 389 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 AP1M1Q9BXS5 423 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 SPRTNQ9H040 489 aaPredicted RBP11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 LIMA1Q9UHB6 759 aaKnown RBP11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 IP6K2Q9UHH9 426 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 SH3BGRL2Q9UJC5 107 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ANAPC7Q9UJX3 599 aa11.37□□□□□ -0.59
PDLIM1P1-201ENST00000604187 C2orf74A8MZ97 194 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 H3BMH7 237 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 KCNN4O15554 427 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 HCRTR1O43613 425 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 PMPCBO75439 489 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 CTSBP07858 339 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 MSH3P20585 1137 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 MMP11P24347 488 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 PPIDQ08752 370 aaKnown RBP11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ATP13A4Q4VNC1 1196 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ZDHHC20Q5W0Z9 365 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ZNF324BQ6AW86 544 aaPredicted RBP11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 RPUSD3Q6P087 351 aaKnown RBP11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 MTFR2Q6P444 385 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 DAAM2Q86T65 1068 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 ZNF655Q8N720 491 aaPredicted RBP11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 C19orf47Q8N9M1 422 aaKnown RBP11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 KCTD6Q8NC69 237 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 OR1N1Q8NGS0 311 aa11.36□□□□□ -0.59
PDLIM1P1-201ENST00000604187 CPLX3Q8WVH0 158 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms