RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 ZBED6CLQ96FA7 236 aaPredicted RBP20.75■□□□□ 0.91
SH3D19-211ENST00000604030 PCED1BQ96HM7 432 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 FBXL18Q96ME1 805 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 ZNF570Q96NI8 536 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 XPNPEP1Q9NQW7 623 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 NCK1P16333 377 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 NADK2Q4G0N4 442 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 C6orf89Q6UWU4 347 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 PYROXD2Q8N2H3 581 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 ZNF563Q8TA94 476 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 C14orf105Q9NVL8 296 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 AASSQ9UDR5 926 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 TRIM17Q9Y577 477 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 PI15O43692 258 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 SCN2BO60939 215 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 NOS1APO75052 506 aaPredicted RBP20.75■□□□□ 0.91
SH3D19-211ENST00000604030 HMGN1P05114 100 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 UGT2B4P06133 528 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 TESMINQ9Y4I5 508 aa20.75■□□□□ 0.91
SH3D19-211ENST00000604030 VNN1O95497 513 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 ATP4BP51164 291 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 PPP2R2BQ00005 443 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 TNFAIP8L1Q8WVP5 186 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 CLEC4DQ8WXI8 215 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 ZNF514Q96K75 400 aaPredicted RBP20.74■□□□□ 0.91
SH3D19-211ENST00000604030 RDH12Q96NR8 316 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 POFUT2Q9Y2G5 429 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 PRODHO43272 600 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 STXBP1P61764 594 aaKnown RBP20.74■□□□□ 0.91
SH3D19-211ENST00000604030 RHDQ02161 417 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 TIGD6Q17RP2 521 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 KLHDC10Q6PID8 442 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 GRIP1Q9Y3R0 1128 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 SLIT2O94813 1529 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 FAM25EA8MYX2 175 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 ARPC2O15144 300 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 MT-CYBP00156 380 aaPredicted RBP20.74■□□□□ 0.91
SH3D19-211ENST00000604030 GLUD1P00367 558 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 GSTM3P21266 225 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 CXorf57Q6NSI4 855 aaKnown RBP20.74■□□□□ 0.91
SH3D19-211ENST00000604030 ACOT12Q8WYK0 555 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 CNPPD1Q9BV87 410 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 RAB11FIP5Q9BXF6 653 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 IMP3Q9NV31 184 aaKnown RBP20.74■□□□□ 0.91
SH3D19-211ENST00000604030 SPEF2Q9C093 1822 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 METTL21EPA6NDL7 271 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 DCAF12L1Q5VU92 463 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 MTMR14Q8NCE2 650 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 UPF1Q92900 1129 aaKnown RBP eCLIP20.74■□□□□ 0.91
SH3D19-211ENST00000604030 GOLGA2P5Q9HBQ8 144 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 TMED5Q9Y3A6 229 aa20.74■□□□□ 0.91
SH3D19-211ENST00000604030 DNTTP04053 509 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 SNX20Q7Z614 316 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 TMEM110Q86TL2 294 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 SIX5Q8N196 739 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 ZNF420Q8TAQ5 688 aaPredicted RBP20.73■□□□□ 0.91
SH3D19-211ENST00000604030 SLC35G5Q96KT7 338 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 CITED4Q96RK1 184 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 TBCCD1Q9NVR7 557 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 CD36P16671 472 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 TPTEP56180 551 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 AKIRIN2Q53H80 203 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 ZCCHC12Q6PEW1 402 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 EPGNQ6UW88 154 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 TSPEARQ8WU66 669 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 FKBPLQ9UIM3 349 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 hCG_2039718K7EN88 272 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 MT-ND1P03886 318 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 CLCN4P51793 760 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 RAPSNQ13702 412 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 GRB14Q14449 540 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 LDB1Q86U70 411 aaPredicted RBP20.73■□□□□ 0.91
SH3D19-211ENST00000604030 KCTD13Q8WZ19 329 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 DNASE1L2Q92874 299 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 MIPEPQ99797 713 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 ACAT2Q9BWD1 397 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 COMMD4Q9H0A8 199 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 USP29Q9HBJ7 922 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 BCAS2O75934 225 aaPredicted RBP20.73■□□□□ 0.91
SH3D19-211ENST00000604030 AKR1D1P51857 326 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 SF1Q15637 639 aaKnown RBP20.73■□□□□ 0.91
SH3D19-211ENST00000604030 SLC10A6Q3KNW5 377 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 CRTC2Q53ET0 693 aaPredicted RBP20.73■□□□□ 0.91
SH3D19-211ENST00000604030 ERMP1Q7Z2K6 904 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 RNF31Q96EP0 1072 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 CGREF1Q99674 301 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 CDADC1Q9BWV3 514 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 FAM53CQ9NYF3 392 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 WDR37Q9Y2I8 494 aa20.73■□□□□ 0.91
SH3D19-211ENST00000604030 PGLSO95336 258 aa20.72■□□□□ 0.91
SH3D19-211ENST00000604030 GIMD1P0DJR0 217 aa20.72■□□□□ 0.91
SH3D19-211ENST00000604030 PRKCHP24723 683 aa20.72■□□□□ 0.91
SH3D19-211ENST00000604030 MOGQ16653 247 aa20.72■□□□□ 0.91
SH3D19-211ENST00000604030 TAF8Q7Z7C8 310 aa20.72■□□□□ 0.91
SH3D19-211ENST00000604030 PDSS2Q86YH6 399 aa20.72■□□□□ 0.91
SH3D19-211ENST00000604030 FAM156AQ8NDB6 213 aa20.72■□□□□ 0.91
SH3D19-211ENST00000604030 TTLQ8NG68 377 aa20.72■□□□□ 0.91
SH3D19-211ENST00000604030 ATG10Q9H0Y0 220 aa20.72■□□□□ 0.91
SH3D19-211ENST00000604030 FARSBQ9NSD9 589 aaKnown RBP20.72■□□□□ 0.91
SH3D19-211ENST00000604030 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms