RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ARHGAP8P85298 464 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 TUBB3Q13509 450 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 FBXO48Q5FWF7 155 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 VWA5B1Q5TIE3 1220 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 DOK6Q6PKX4 331 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 LRRTM4Q86VH4 590 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 TCAIMQ8N3R3 496 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 HM13Q8TCT9 377 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 MAPK15Q8TD08 544 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 FOPNLQ96NB1 174 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 CD244Q9BZW8 370 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 MID1IP1Q9NPA3 183 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 SEMA4BQ9NPR2 832 aaPredicted RBP17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 ARL15Q9NXU5 204 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 GULP1Q9UBP9 304 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 EBF1Q9UH73 591 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 EIF2B4Q9UI10 523 aaKnown RBP17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 OR1A2Q9Y585 309 aa17.28■□□□□ 0.36
SHKBP1-224ENST00000600718 H3BM21 787 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 SLC31A1O15431 190 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 PSIP1O75475 530 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 IGFALSP35858 605 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 PREPP48147 710 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 ABRQ12979 859 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 FZD5Q13467 585 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 UBXN2BQ14CS0 331 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 CRTC3Q6UUV7 619 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 CLNKQ7Z7G1 428 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 C11orf96Q7Z7L8 435 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 ALYREFQ86V81 257 aaKnown RBP17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 DENND6BQ8NEG7 585 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 MAFAQ8NHW3 353 aaPredicted RBP17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 FOXJ1Q92949 421 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 ESAMQ96AP7 390 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 ZBTB26Q9HCK0 441 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 TNFRSF12AQ9NP84 129 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 WWOXQ9NZC7 414 aa17.27■□□□□ 0.36
SHKBP1-224ENST00000600718 TRPM6Q9BX84 2022 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 KLHL33A6NCF5 533 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 C19orf67A6NJJ6 358 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 FAM170BA6NMN3 283 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 FCHO1O14526 889 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 SERPINA6P08185 405 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 HOXC4P09017 264 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 HNMTP50135 292 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 BNIP1Q12981 228 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 SLC9B1Q4ZJI4 515 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 METTL21CQ5VZV1 264 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 AMZ2Q86W34 360 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 LILRA3Q8N6C8 439 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 AGAP11Q8TF27 550 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 APOOQ9BUR5 198 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 NUF2Q9BZD4 464 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 RMI1Q9H9A7 625 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 ACTR5Q9H9F9 607 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 CD93Q9NPY3 652 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 STK38LQ9Y2H1 464 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 TMEM233B4DJY2 109 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 PPP6CO00743 305 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 KMOO15229 486 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 CATP04040 527 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 MAP4P27816 1152 aaKnown RBP17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 PDHA2P29803 388 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 GGT5P36269 586 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 HSPA7P48741 367 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 PKNOX1P55347 436 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 RPA4Q13156 261 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 PDCD2Q16342 344 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 C18orf21Q32NC0 220 aaPredicted RBP17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 FAM91A1Q658Y4 838 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 ACAD11Q709F0 780 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 ZNF382Q96SR6 550 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 CCDC28BQ9BUN5 200 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 DPEP2Q9H4A9 486 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 ASB1Q9Y576 335 aa17.26■□□□□ 0.35
SHKBP1-224ENST00000600718 GIPC1O14908 333 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 AZIN1O14977 448 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 RASSF9O75901 435 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 ESRRBO95718 433 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 OXTRP30559 389 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 GTF2H2Q13888 395 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 RBBP7Q16576 425 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 GTF2H2CQ6P1K8 395 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 GOLGA7Q7Z5G4 137 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 UBALD2Q8IYN6 164 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 OXR1Q8N573 874 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 TMEM79Q9BSE2 394 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 TUBB6Q9BUF5 446 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 NMUR2Q9GZQ4 415 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 TCF7L2Q9NQB0 619 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 SAR1AQ9NR31 198 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 OPTCQ9UBM4 332 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 FIS1Q9Y3D6 152 aa17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 SPTBN5Q9NRC6 3674 aaKnown RBP17.25■□□□□ 0.35
SHKBP1-224ENST00000600718 K7EPI3 171 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 CACNB4O00305 520 aaPredicted RBP17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 STK16O75716 305 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 SEMA4FO95754 770 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 BTKQ06187 659 aa17.24■□□□□ 0.35
SHKBP1-224ENST00000600718 GAS6Q14393 721 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms